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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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Bruker: Avance III HD Aeon 800 MHz Wide-Bore NMR Spectrometer Resource Report Resource Website |
Bruker: Avance III HD Aeon 800 MHz Wide-Bore NMR Spectrometer (RRID:SCR_028513) | instrument resource | High-field, ultra-sensitive system used by researchers for deep structural, dynamic, and metabolic analyses of complex molecules. Console: Avance III HD; Magnet: Aeon; Field Strength: 800 MHz Wide-bore; Software: TopSpin 3.8 on Alma 9.4; Probe: 3.2mm Efree HCN MAS; 3.2mm HXY MAS; 1.9mm HCN MAS; 1.3mm HCN MAS; 0.7mm HCND ultra-fast MAS. | NMR, spectrometer, 800 MHz Wide-Bore NMR, | is used by: Ohio State University Campus Chemical Instrument Center NMR Core Facility | OD S10 OD012303 | Commercially available | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_028513.pdf , https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/Avance%20III%20HD%20SCR_028513.pdf | Model_Number_Bruker_Avance_III_HD_Aeon_800 MHz_Wide-Bore | https://people.ohioinnovationexchange.org/equipment/1696072, https://www.bruker.com/en/products-and-solutions/mr/nmr/avance-nmr-spectrometer.html | SCR_028513 | SciCrunch Registry | , Avance III HD Aeon 800 MHz Wide-Bore NMR Spectrometer system | 2026-11-07 12:07:16 | 0 | |||||
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RagTag Resource Report Resource Website 50+ mentions |
RagTag (RRID:SCR_027293) | software resource, software toolkit, source code | Collection of software tools for scaffolding and improving modern genome assemblies. Reference-based scaffolder. Used for fast and flexible genome assembly scaffolding and improvement. | Reference-based scaffolder, genome assembly scaffolding, scaffolding, genome assemblies, | European Research Council ; Howard Hughes Medical Institutes ; NSF ; OD S10OD028632; Swiss National Science Foundation |
PMID:36522651 | SCR_027293 | SciCrunch Registry | 2026-11-07 12:06:45 | 91 | ||||||||||
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SAIBR Resource Report Resource Website 1+ mentions |
SAIBR (RRID:SCR_024804) | software application, software resource | Software application as platform independent protocol and FIJI plug-in to correct for autofluorescence using standard filter sets and illumination conditions. Spectral autofluorescence correction method based on simple 2- or 3-Channel images implemented in Python and Fiji. Used for performing spectral autofluorescence correction on biological images. | performing spectral autofluorescence correction, biological images, autofluorescence correction, | is a plug in for: Fiji | OD P40 OD010440 | PMID:35713287 | Free, Available for download, Freely available | SCR_024804 | SciCrunch Registry | Spectral Autofluorescence Image Correction By Regression | 2026-11-07 12:06:05 | 1 | |||||||
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Development of Immunological Reagents for the Identification of New World Monkey Biomarkers Resource Report Resource Website |
Development of Immunological Reagents for the Identification of New World Monkey Biomarkers (RRID:SCR_024982) | data or information resource, portal, project portal | Project portal for generating recombinant NWM proteins, producing mouse monoclonal antibodies against New World Monkeys, validating immunological assays using these reagents, and distributing reagents and related scientific information to interested investigators. | NIH, ORIP, Office of Research Infrastructure Programs, generating recombinant NWM proteins, producing mouse monoclonal antibodies against New World Monkeys, validating immunological assays, | OD 1R24OD030215-01A1 | SCR_024982 | SciCrunch Registry | 2026-11-07 12:06:15 | 0 | |||||||||||
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Hybrid Rat Diversity Program Resource Report Resource Website 1+ mentions |
Hybrid Rat Diversity Program (RRID:SCR_024983) | data or information resource, portal, project portal | Portal for Hybrid Rat Diversity Program with goal to extend the use of rat models for clinical translation through establishing animal resource and genomic dataset to facilitate the translation of laboratory research to clinical relevance. Specifically, the Hybrid Rat Diversity Panel resource provides the research community with foundation for systems genetics and tool for forward genetics. | NIH, ORIP, Office of Research Infrastructure Programs, rat models for clinical translation, | OD 5R24OD024617-06 | DOI:10.1096/fasebj.2020.34.s1.03705 | SCR_024983 | SciCrunch Registry | 2026-11-07 12:06:06 | 2 | ||||||||||
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Center for Neuroanatomy with Neurotropic Viruses Resource Report Resource Website 100+ mentions |
Center for Neuroanatomy with Neurotropic Viruses (RRID:SCR_024984) | CNNV | data or information resource, organization portal, portal, project portal | This national resource was created to provide neuroscience community with access to reagents, training and facilities that are necessary to use neurotropic viruses as transneuronal tracers. | NIH, ORIP, Office of Research Infrastructure Programs, neurotropic viruses, transneuronal tracers, | OD 2P40OD010996-16 | https://www.cnnv.pitt.edu/ | SCR_024984 | SciCrunch Registry | 2026-11-07 12:06:08 | 115 | |||||||||
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SEQUIN:Synaptic Evaluation and QUantification by Imaging Nanostructure Resource Report Resource Website 1+ mentions |
SEQUIN:Synaptic Evaluation and QUantification by Imaging Nanostructure (RRID:SCR_026029) | SEQUIN | data analysis software, data processing software, software application, software resource, source code | Analysis software for identification of synaptic loci from 3D image datasets. | 3D image datasets, 3D image, synaptic loci, synaptic loci identification, | OD OD021629 | PMID:33490984 | Free, Available for download, Freely available | SCR_026029 | SciCrunch Registry | Synaptic Evaluation and QUantification by Imaging Nanostructure | 2026-11-07 12:06:31 | 1 | |||||||
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Northwestern University Center for Advanced Molecular Imaging Core Facility Resource Report Resource Website 10+ mentions |
Northwestern University Center for Advanced Molecular Imaging Core Facility (RRID:SCR_021192) | CAMI | access service resource, core facility, service resource | Provides access to range of preclinical imaging modalities and support services. These include MRI, nuclear imaging (PET, SPECT, and CT), in vivo bioluminescence and fluorescence imaging, animal housing and prep spaces, and tissue culture. Image analysis services are available, as are software packages (JIM, Amira, Matlab) and a workstation for users to perform their own data analysis. Imaging services can be provided for investigators' own animal models, or animal models can be supplied by the Developmental Therapeutics Core. | USEDit, MRI, nuclear imaging, in vivo bioluminescence and fluorescence imaging, animal housing and prep spaces, tissue culture, image analysis, ABRF, micro PET, micro SPECT, micro CT |
is listed by: ABRF CoreMarketplace is related to: NoCTURN |
NCI CA060553; OD OD016398 |
open | ABRF_379 | https://coremarketplace.org/?FacilityID=379 | SCR_021192 | SciCrunch Registry | Northwestern University Center for Advanced Molecular Imaging (CAMI) | 2026-11-07 12:05:37 | 28 | |||||
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Penn State Hershey College of Medicine Zebrafish Functional Genomics Core Facility Resource Report Resource Website 1+ mentions |
Penn State Hershey College of Medicine Zebrafish Functional Genomics Core Facility (RRID:SCR_021199) | access service resource, core facility, service resource | Provides Penn State research community with modern, centralized facility for housing, breeding and performing experiments with zebrafish.Provides physical and intellectual infrastructure for investigators whose research can benefit from use of zebrafish as model system. | USEDit, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: Pennsylvania State Hershey College of Medicine; Pennsylvania; USA |
OD OD016619 | restricted | ABRF_1177 | https://coremarketplace.org/?FacilityID=1177 | SCR_021199 | SciCrunch Registry | Penn State Zebrafish Functional Genomics Core | 2026-11-07 12:05:46 | 4 | ||||||
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University of California at Santa Cruz Life Sciences Microscopy Center Core Facility Resource Report Resource Website 50+ mentions |
University of California at Santa Cruz Life Sciences Microscopy Center Core Facility (RRID:SCR_021135) | access service resource, core facility, service resource | Core facility affiliated with Institute for Biology of Stem Cells.Provides imaging instrumentation to biology research community including personalized assistance on various aspects of imaging.Offers assistance in experimental design,training on shared microscopes, image visualization and image analysis. | USEDit, IBSC, imaging instrumentation, imaging personalized assistance, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: University of California at Santa Cruz; California; USA |
OD OD023528 | ABRF_1168 | https://coremarketplace.org/?FacilityID=1168 | SCR_021135 | SciCrunch Registry | UCSC Life Sciences Microscopy Center | 2026-11-07 12:05:13 | 61 | |||||||
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New York University Grossman School of Medicine Applied Bioinformatics Laboratories Facility Resource Report Resource Website 10+ mentions |
New York University Grossman School of Medicine Applied Bioinformatics Laboratories Facility (RRID:SCR_019178) | access service resource, core facility, service resource | Core provides computational analysis for high throughput genomic data, including but not limited to, next generation sequencing data. Our mission is to accelerate scientific discoveries by guiding experimental design, performing robust data quality assessment, and carrying out comprehensive computational analyses. Registration to iLab required. | USEDit, next generation sequencing data, genomic data, data quality assessment, computational analyses, ABRF, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: New York University School of Medicine; New York; USA |
NCI P30CA016087; OD S10 OD010751 |
ABRF_819 | https://coremarketplace.org/?FacilityID=819 | SCR_019178 | SciCrunch Registry | Applied Bioinformatics Laboratories | 2026-11-07 12:05:34 | 10 | |||||||
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University of Colorado Anschutz Medical Campus Cancer Center Animal Imaging Shared Resource Core Facility Resource Report Resource Website 10+ mentions |
University of Colorado Anschutz Medical Campus Cancer Center Animal Imaging Shared Resource Core Facility (RRID:SCR_021980) | AISR | access service resource, core facility, service resource | Enables noninvasive imaging of animal models of human disease. Provides access and training on state-of-the-art animal scanners (MRI, CT, optical, PET/SPECT) for live imaging on rodents, perfoms all animal handling and assist with image analysis to establish imaging biomarkers. | noninvasive imaging, animal models, human disease, ABRF, USEDit |
is listed by: ABRF CoreMarketplace has parent organization: University of Colorado School of Medicine; Colorado; USA |
NCI P30CA046934; OD S10OD023485; OD S10OD027023 |
open | ABRF_1304 | https://coremarketplace.org/?FacilityID=1304 | SCR_021980 | SciCrunch Registry | University of Colorado Anschutz Medical Campus Cancer Center Animal Imaging Shared Resource, Animal Imaging Shared Resource | 2026-11-07 12:05:47 | 19 | |||||
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University of California at San Diego Institute for Genomic Medicine Genomics Center Core Facilitiy Resource Report Resource Website 1+ mentions |
University of California at San Diego Institute for Genomic Medicine Genomics Center Core Facilitiy (RRID:SCR_022740) | access service resource, core facility, service resource | Provides services including sequencing library preparation and sequencing on Illumina MiSeq and NovaSeq 6000 platforms. Supports single cell sequencing on 10X Genomics Chromium Controller. Provides Illumina Infinium Beadchips, which includes variety of whole genome genotyping arrays as well as Infinium MethylationEPIC BeadChip. | USEDit, ABRF, sequencing library preparation, sequencing, single cell sequencing, whole genome genotyping arrays |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of California at San Diego; California; USA |
NCI P30CA023100; NIDDK P30DK063491; NIDDK P30DK120515; OD S10 OD026929 |
ABRF_1025 | https://coremarketplace.org/?FacilityID=1025&citation=1 | SCR_022740 | SciCrunch Registry | UCSD IGM Genomics Center | 2026-11-07 12:05:51 | 2 | |||||||
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University of Pittsburgh Center for Research Computing Core Facility Resource Report Resource Website 100+ mentions |
University of Pittsburgh Center for Research Computing Core Facility (RRID:SCR_022735) | access service resource, core facility, service resource | Supports leading edge research with free access to advanced computing hardware and software. | USEDit, ABRF, advanced computing hardware and software services |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of Pittsburgh; Pennsylvania; USA |
OD S10OD028483 | ABRF_1544 | https://coremarketplace.org/?FacilityID=1544&citation=1 | SCR_022735 | SciCrunch Registry | Center for Research Computing | 2026-11-07 12:05:52 | 385 |
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