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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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New England National Primate Research Center Resource Report Resource Website |
New England National Primate Research Center (RRID:SCR_002887) | NERPRC | biomaterial supply resource, material resource, organism supplier | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 12,2023. A U.S. Regional Primate Research Center that focuses on AIDS, cancer, neuropsychiatric disorders, drug addiction, and neurodegenerative disease. The Division of Primate Resources provides researchers with the services and facilities to support biomedical research. It offers a broad spectrum of services ranging from analysis of tissue specimens to partnership investigations with leading biomedical research institutions. Outside investigators have access to tissue specimens, organs, blood, skeletal structures, and viral specimens. Services include veterinary services, animals and animal care, surgical and radiographic services, timed mating, biocontainment, pathology services, and professional and technical expertise. Additional diagnostic and research services at NEPRC include testing for antiviral antibodies, DNA cloning, and DNA sequencing. The colony of nine species includes rhesus macaques and other Old World monkeys and New World species including the common marmoset and squirrel monkey. Other species can be obtained. Animals with exceptional characteristics (specific-pathogen-free, timed pregnancy, surgically altered, etc.) can be made available if needed. Scientists wishing to conduct research at the center must have projects reviewed and approved by the center animal allocation committee. | non human primate, flow cytometry, aids, behavioral, brain imaging, callithrix, macaque, parkinsons disease, herpesvirus, marmoset, monkey, neurobiology, neurodegenerative, neuropharmacology, oncogene, pathogenesis, pharmacology, primate, rhesus, rhesus macaque, squirrel monkey, tissue, vaccine |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Harvard Medical School; Massachusetts; USA |
Human immunodeficiency virus, Simian immunodeficiency virus, AIDS, Oncogenic herpesviruses, Infectious disease, Neurodegenerative disease, Cocaine abuse, Cancer, Neuropsychiatric disorder, Drug addiction, Parkinson's disease | NCRR P51 RR000168 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-25596 | SCR_002887 | 2026-09-05 06:24:55 | 0 | ||||||
|
flowFlowJo Resource Report Resource Website 10+ mentions |
flowFlowJo (RRID:SCR_000410) | software resource | A Bioconductor package that can import gates defined by the commercial package FlowJo and work with them in a manner consistent with the other flow packages in Bioconductor. FlowJo is a commercial GUI based software package from TreeStar Inc. for the visualization and analysis of flow cytometry data. One of the FlowJo standard export file types is the FlowJo Workspace. This is an XML document that describes files and manipulations that have been performed in the FlowJo GUI environment. This package can take apart the FlowJo workspace and deliver the data into R in the flowCore paradigm. | software package, mac os x, unix/linux, windows, r, flow cytometry |
is listed by: OMICtools has parent organization: Bioconductor |
PMID:19956421 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_05598 | SCR_000410 | flowFlowJo - Tools for extracting information from a FlowJo workspace and working with the data in the flowCore paradigm | 2026-09-05 06:24:19 | 21 | |||||||
|
BD Biosciences: FACSCalibur Flow Cytometry System Resource Report Resource Website 100+ mentions |
BD Biosciences: FACSCalibur Flow Cytometry System (RRID:SCR_000401) | BD FACSCalibur system | instrument resource | Automated benchtop flow cytometry system. It allows measuring four fluorochrome-conjugates, forward and side scatter., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | flow cytometry, hardware, instrument, equipment | has parent organization: BD Biosciences | THIS RESOURCE IS NO LONGER IN SERVICE | https://drive.google.com/file/d/1v6yeGl7IxHS0_Ezn35dZ9qzu27jIBh52/view?usp=drivesdk | SciRes_000153 | https://www.bdbiosciences.com/content/dam/bdb/marketing-documents/BD_FACSCalibur_instructions.pdf | SCR_000401 | FACSCalibur flow cytometer | 2026-09-05 06:24:18 | 411 | |||||
|
flowStats Resource Report Resource Website 1+ mentions |
flowStats (RRID:SCR_000399) | software resource | Software using statistical methods and functionality to analyze flow data that is beyond the basic infrastructure provided by the flowCore package. | software package, mac os x, unix/linux, windows, r, cell based assay, flow cytometry |
is listed by: OMICtools has parent organization: Bioconductor |
Free, Available for download, Freely available | OMICS_05611 | SCR_000399 | flowStats - Statistical methods for the analysis of flow cytometry data | 2026-09-05 06:24:19 | 1 | ||||||||
|
NovoExpress Resource Report Resource Website 50+ mentions |
NovoExpress (RRID:SCR_024676) | data analysis software, data processing software, software application, software resource | NovoExpress software enables sample acquisition and analysis. User hands-on time is minimized with the walk-away autosampler functionality as well as batch analysis, statistics, and reporting. | Agilent, flow cytometry analysis, flow cytometry | SCR_024676 | , NovoExpress flow cytometry software, NovoExpress version 1.6.2, Agilent NovoExpress | 2026-09-05 06:30:33 | 90 | |||||||||||
|
Luminex: xMAP Intelliflex DR-SE System Resource Report Resource Website 1+ mentions |
Luminex: xMAP Intelliflex DR-SE System (RRID:SCR_023348) | instrument resource | Flow cytometry based multiplex bead array reader with ability to simultaneously acquire data for two reporter channels per analyte. Compact, flow based, multiplex platform that combines low- and high-plex capabilities, quick time to reliable results, and ability to simultaneously acquire data for two parameters per analyte. | Instrument, equipment, USEDit, flow cytometry, multiplex bead array reader, simultaneously acquire data, two reporter channels per analyte, two parameters per analyte | is listed by: USEDit | https://www.luminexcorp.com/intelliflex/ | SCR_023348 | 2026-09-05 06:30:22 | 5 | ||||||||||
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PRECISESADS Resource Report Resource Website 10+ mentions |
PRECISESADS (RRID:SCR_003882) | PRECISESADS | organization | A project that will study 2,500 people with various systemic autoimmune diseases (SADs), gathering data on the molecular causes of their disease as well as their clinical symptoms, enabling them to pave the way for a new classification of these diseases. The goal is to use OMICs and bioinformatics to identify new classifications for diseases known to share common pathophysiological mechanisms. Results will be shared to deliver a new molecular taxonomy of systemic autoimmune diseases. In order to achieve this, PRECISEADS is informing on a regular basis on the project implementation and results, and involving stakeholders from Europe in its activities in order to broaden the project impact and increase opportunities for cooperation. | biomarker, diagnostic, basic research, clinical, genomics, transcriptomics, epigenomics, flow cytometry, cellular separations, pre-clinical model, proteomics, metabolomics, serology, tissue, taxonomy, imaging, biosample, sample collection, biobanking, blood, urine |
is listed by: Consortia-pedia is related to: Centre for Genomics and Oncological Research is related to: Progress and Health Foundation; Seville; Spain is related to: Spanish National Research Council; Madrid; Spain is related to: August Pi i Sunyer Biomedical Research Institute; Barcelona; Spain is related to: German Rheumatism Research Centre Berlin; Berlin; Germany is related to: Bellvitge Biomedical Research Institute is related to: Karolinska Institute; Stockholm; Sweden is related to: Hannover Medical School; Lower Saxony; Germany is related to: Medical University of Vienna; Vienna; Austria is related to: Cyprus Institute of Neurology and Genetics; Nicosia; Cyprus is related to: University of Granada; Granada; Spain is related to: University of Milan; Milan; Italy is related to: Catholic University of Louvain; Louvain-la-Neuve; Belgium is related to: University of Western Brittany; Brest; France is related to: University of Geneva; Geneva; Switzerland is related to: University of Szeged; Szeged; Hungary is related to: Althia is related to: Quartz Bio is related to: Catholic University of Leuven; Flemish Brabant; Belgium has parent organization: Progress and Health Foundation; Seville; Spain has parent organization: Centre for Genomics and Oncological Research |
Innovative Medicines Initiative ; EFPIA |
nlx_158209 | SCR_003882 | PRECISESADS - Molecular reclassification to find clinically useful biomarkers for systemic autoimmune diseases | 2026-09-05 06:25:10 | 19 | |||||||
|
FlowJo Resource Report Resource Website 10000+ mentions |
FlowJo (RRID:SCR_008520) | data analysis software, data processing software, software application, software resource | Software for single-cell flow cytometry analysis. Its functions include management, display, manipulation, analysis and publication of the data stream produced by flow and mass cytometers. | single-cell analysis, flow cytometry, flow cytometer, mass cytometer |
is listed by: SoftCite has plug in: SPADE has plug in: flowMeans has plug in: DownSample has plug in: FlowSOM |
nif-0000-30575 | SCR_008520 | FlowJo® | 2026-09-05 06:26:24 | 73382 | |||||||||
|
FloMax Resource Report Resource Website 100+ mentions |
FloMax (RRID:SCR_014437) | data acquisition software, data analysis software, data processing software, software application, software resource | Software for acquisition and analysis of flow cytometry data. FloMax data analysis works with data from flow cytometers that support the flow cytometry file standard (FCS). FloMax operates on computers with Windows 95, 98, and 2000., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | flow cytometry, data acquisition software, data analysis software, fcs | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_014437 | 2026-09-05 06:27:46 | 350 | |||||||||||
|
Miltenyi Biotec Resource Report Resource Website 10000+ mentions |
Miltenyi Biotec (RRID:SCR_008984) | commercial organization | An Organization portal, Antibody supplier, Service resource, | biotechnology, biomedical, cellular therapy, cell isolation, flow cytometry, sample preparation, cell culture, molecular analysis, clinical application, small animal imaging | is related to: ONE Study | grid.59409.31, nlx_152412, Wikidata: Q1671300, Crossref funder ID: 501100004176, ISNI: 0000 0004 0552 5033 | https://ror.org/00qhe6a56 | SCR_008984 | Miltenyi Biotec Inc., Miltenyi Biotec GmbH | 2026-09-05 06:26:31 | 21314 | ||||||||
|
DownSample Resource Report Resource Website 10+ mentions |
DownSample (RRID:SCR_021056) | software resource | Software tool to subset samples in FlowJo software.Reduces number of events in data matrix by generating subpopulation containing cells distributed regularly or randomly throughout selected parent population. | subset samples, generating subpopulation containing cells, reduce event number, data matrix, flow cytometry | is a plug in for: FlowJo | https://docs.flowjo.com/seqgeq/dimensionality-reduction/downsample/ | SCR_021056 | 2026-09-05 06:29:33 | 10 | ||||||||||
|
BD Biosciences: Canto II Flow Cytometer Resource Report Resource Website 50+ mentions |
BD Biosciences: Canto II Flow Cytometer (RRID:SCR_018056) | instrument resource | Benchtop flow cytometer features reliable performance and accurate results for experiments requiring up to 10 parameters. Fixed alignment flow cell minimizes startup time and improves reproducibility. Patented optical design maximizes signal detection and increases sensitivity and resolution for each color in multicolor assay. | ABRF, Flow Cytometer, benchtop analyzer, cell analyzer, flow cytometry, multicolor analysis, BD FACSCanto II, instrument, equipment | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018056.pdf | Model_Number_Canto II | https://www.bdbiosciences.com/content/dam/bdb/marketing-documents/BD_FACSCanto_II_brochure.pdf | SCR_018056 | Canto II | 2026-09-05 06:28:30 | 58 | |||||||
|
Luminex: 100 Flow Cytometry Analyzer System Resource Report Resource Website 10+ mentions |
Luminex: 100 Flow Cytometry Analyzer System (RRID:SCR_018025) | instrument resource | Flow cytometry analyzer system for individual labs that performs up to 100 different tests in single reaction volume and can use either magnetic beads or plain polystyrene beads. | ABRF, suspension array analyzer, flow cytometry, magnetic bead, polystyrene bead, analysis, Luminex Corporation, instrument, equipment |
is listed by: USEDit is related to: Thermo Fisher: Luminex 200 Instrument System |
https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018025.pdf | https://www.luminexcorp.com/research-luminex-100200/ | SCR_018025 | Luminex 100 System | 2026-09-05 06:28:29 | 21 | ||||||||
|
FluoroFinder Resource Report Resource Website 10+ mentions |
FluoroFinder (RRID:SCR_015485) | service resource | Platform provides tools and web services for multicolor fluorescence experiment design, flow cytometry, and microscopy. Provides online spectra viewer and flow cytometry panel design tools and spectral analysis. By integrating experiment design tools featuring preloaded instrument configurations with comprehensive antibody database, panel builder speeds up flow cytometry experiment design. | Multicolor fluorescence experiment design tools and web services, flow cytometry, microscopy, fluorescence, FluoroFinder, panel builder, flow cytometry experiment design |
is used by: University of Michigan Medical School; Michigan; USA is used by: Merck is used by: ARIAD is used by: University of Washington School of Medicine; Washington; USA is used by: Celgene is used by: University of Florida College of Medicine; Florida; USA is recommended by: University of Rochester Medical Center Neurobiology and Anatomy |
SCR_015485 | 2026-09-05 06:27:55 | 11 | |||||||||||
|
MACSQuantify Resource Report Resource Website 50+ mentions |
MACSQuantify (RRID:SCR_020943) | data acquisition software, data analysis software, data processing software, software application, software resource, standalone software | Software provides user interface for data acquisition on MACSQuant Analyzer Flow Cytometer Instrument and also works as stand alone application for flow cytometry data analysis. | MACSQuant Analyzer Flow Cytometer data acquisition, data analysis, flow cytometry data analysis, flow cytometry, Miltenyi Biotec | Restricted | SCR_020943 | MACSQuantify TM Software, MACSQuantify Software | 2026-09-05 06:29:31 | 58 | ||||||||||
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University of Texas San Antonio Cell Analysis Core Facility Resource Report Resource Website |
University of Texas San Antonio Cell Analysis Core Facility (RRID:SCR_010147) | access service resource, core facility, service resource | Core provides access to instrumentation in flow cytometry, confocal microscopy, and consultative scientific services. Offers comprehensive training in cross-translational cytometry and imaging, including experimental design, sample preparation, instrument operation, and data analysis. | flow cytometry, confocal microscopy, consultative scientific services, training, cytometry and imaging, experimental design, sample preparation, instrument operation, data analysis, | has parent organization: University of Texas at San Antonio; Texas; USA | nlx_156627 | http://utsa.eagle-i.net/i/00000135-1b22-a89c-d7c8-cf3780000000 | SCR_010147 | UTSA RCMI Biophotonics Core, UTSA Cell Analysis Core | 2026-09-05 06:33:42 | 0 | ||||||||
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University of Rochester Medical Center Flow Cytometry Core Facility Resource Report Resource Website 1+ mentions |
University of Rochester Medical Center Flow Cytometry Core Facility (RRID:SCR_012360) | FCR | access service resource, core facility, service resource | Provides investigators with instrumentation along with expertise. Core instrumentation includes traditional analytical cytometers, full spectrum cytometer, cell sorters, imaging cytometers, small(nano) particle detection system, metabolomics instrument, and mass cytometer. | USEDit, ABRF, flow cytometry, cell sorting |
is listed by: ScienceExchange is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of Rochester; New York; USA |
ABRF_1634, SciEx_12076 | https://coremarketplace.org/?FacilityID=1634&citation=1 | http://www.scienceexchange.com/facilities/flow-cytometry-core-rochester | SCR_012360 | URMC Flow Cytometry Core, URMC Flow Cytometry Shared Resource, University of Rochester Medical Center Flow Cytometry Core | 2026-09-05 06:33:54 | 3 | ||||||
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La Jolla Institute for Immunology Flow Cytometry Core Facility Resource Report Resource Website 1+ mentions |
La Jolla Institute for Immunology Flow Cytometry Core Facility (RRID:SCR_014832) | access service resource, core facility, service resource | Flow cytometry core which offers a wide range of routine and custom flow cytometry, mass cytometry, cell sorting services, data analysis, strategic planning for novel assays, user training, and full scale research collaborations. | cytometry, flow cytometry, mass cytometry, cell sorting services, data analysis, strategic planning, assays, user training, research collaboration |
is listed by: ABRF CoreMarketplace has parent organization: La Jolla Institute for Immunology |
Available on per hour rates | ABRF_5678 | https://coremarketplace.org/RRID:SCR_014832/?citation=1 | http://livesite.liai.org/pages/core_flow | SCR_014832 | La Jolla Institute for Allergy and Immunology Flow Cytometry Core Facility | 2026-09-05 06:34:00 | 3 | ||||||
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Salk Institute Flow Cytometry Core Facility Resource Report Resource Website 10+ mentions |
Salk Institute Flow Cytometry Core Facility (RRID:SCR_014839) | access service resource, core facility, service resource | Core facility dedicated to advancing research projects requiring cell sorting and/or analysis of cell populations by flow cytometry. The core offers training on and access to shared use instrumentation for analytical flow cytometry, services for fluorescence activated cell sorting (FACS) as well as technical consultation and support on experimental design, execution, and data analysis. | core facility, la jolla, flow cytometry, facs, fluorescent activated cell sorting, |
is listed by: ABRF CoreMarketplace has parent organization: Salk Institute for Biological Studies |
Salk Institute Flow Cytometry Core Facility ; NCI CCSG P30 014195 |
ABRF_1643 | https://coremarketplace.org/?FacilityID=1643&citation=1 | SCR_014839 | Salk Institute Flow Cytometry Core Facility (FACS) | 2026-09-05 06:34:00 | 22 | |||||||
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Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Flow Cytometry Resource Report Resource Website |
Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Flow Cytometry (RRID:SCR_015333) | access service resource, core facility, service resource | THIS RESOURCE IS NO LONGER IN SERVICE.Documented on July 27,2022. Core facility which offers various options for instrumentation, from single-laser benchtop analyzers to complex multi-laser cell sorts for cell analysis and sorting. Technical assistance is available for the evaluation and interpretation of data as well as assistance in experimental design. | flow cytometry, cell analysis, technical assistance, experimental design |
is listed by: NIDDK Information Network (dkNET) has parent organization: Fred Hutchinson Cancer Center is organization facet of: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology |
cancer | NIDDK P30DK056465 | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_015333 | 2026-09-05 06:34:05 | 0 |
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