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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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O'Brien Kidney Centers Resource Report Resource Website 1+ mentions |
O'Brien Kidney Centers (RRID:SCR_015270) | data or information resource, disease-related portal, portal, resource, topical portal | Research program whose aim is to make state-of-the art technologies and resources accessible to a broad spectrum of investigators pursuing studies in kidney research areas. | renal, program, kidney, research, centers |
is listed by: NIDDK Information Network (dkNET) is affiliated with: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases has organization facet: Duke O'Brien Center for Kidney Research has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis has organization facet: UAB-UCSD Core Center for Acute Kidney Injury Research has organization facet: Pittsburgh Center for Kidney Research has organization facet: University of Michigan Kidney Translational Core Center has organization facet: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center has organization facet: George M. O'Brien Kidney Center at Yale |
NIDDK P30 DK17005 | Available to the research community | https://www.niddk.nih.gov/research-funding/current-opportunities/rfa-dk-17-005 | SCR_015270 | SciCrunch Registry | 2026-10-17 01:28:55 | 1 | ||||||||
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Vanderbilt Diabetes Research and Training Center Resource Report Resource Website |
Vanderbilt Diabetes Research and Training Center (RRID:SCR_015153) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | University-affiliated center that facilitates the discovery, application, and translation of scientific knowledge to improve the lives of people with diabetes. | diabetes research, training service |
is listed by: NIDDK Information Network (dkNET) has parent organization: Vanderbilt University; Tennessee; USA is parent organization of: Vanderbilt Diabetes Research and Training Center Transgenic Mouse and ES Cell Shared Resource is parent organization of: Vanderbilt Diabetes Research and Training Center Metabolic Physiology Shared Resource is parent organization of: Vanderbilt Diabetes Research and Training Center Vanderbilt Diet Body Composition and Metabolism Core Facility is parent organization of: Vanderbilt Diabetes Research and Training Center Islet Procurement and Analysis Core is parent organization of: Vanderbilt Diabetes Research and Training Center Cell Imaging Shared Resource Core Facility is parent organization of: Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core Facility has organization facet: Vanderbilt Diabetes Research and Training Center Cell Imaging Shared Resource Core Facility has organization facet: Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core Facility has organization facet: Vanderbilt Diabetes Research and Training Center Islet Procurement and Analysis Core has organization facet: Vanderbilt Diabetes Research and Training Center Metabolic Physiology Shared Resource has organization facet: Vanderbilt Diabetes Research and Training Center Transgenic Mouse and ES Cell Shared Resource has organization facet: Vanderbilt Diabetes Research and Training Center Vanderbilt Diet Body Composition and Metabolism Core Facility is organization facet of: Diabetes Research Centers |
Diabetes | NIDDK DK20593 | Available to the research community | SCR_015153 | SciCrunch Registry | 2026-10-17 01:28:59 | 0 | ||||||||
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Indiana O'Brien Center for Advanced Microscopic Analysis Resource Report Resource Website |
Indiana O'Brien Center for Advanced Microscopic Analysis (RRID:SCR_015271) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Imaging center which provides renal and urological researchers access to intravital optical microscopy and 3-dimensional quantitative digital image analysis. | kidney imaging center, kidney imaging analysis, microscopy center, microscopic analysis center |
is listed by: NIDDK Information Network (dkNET) has parent organization: Indiana University School of Medicine; Indiana; USA is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Biosensor Development Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Administration Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Digital Image Analysis Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Education Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Probe Delivery Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Digital Image Analysis Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Probe Delivery Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Biosensor Development Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Education Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Administration Core is organization facet of: O'Brien Kidney Centers |
NIDDK P30DK079312 | Available to the research community | SCR_015271 | SciCrunch Registry | 2026-10-17 01:29:10 | 0 | |||||||||
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Gregory Fleming James Cystic Fibrosis Research Center Resource Report Resource Website |
Gregory Fleming James Cystic Fibrosis Research Center (RRID:SCR_015392) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center that maintains core facilities available for studies of cell biology, ion transport, and translational aspects of cystic fibrosis research. | cystic fibrosis foundation, ion transport, cell biology, cystic fibrosis research center |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Alabama at Birmingham School of Medicine; Alabama; USA is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Assay Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Assay Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core is organization facet of: Cystic Fibrosis Research and Translation Centers |
Cystic Fibrosis | NIDDK P30DK072482; Cystic Fibrosis Foundation |
Available to the research community | SCR_015392 | SciCrunch Registry | 2026-10-17 01:29:11 | 0 | ||||||||
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Cystic Fibrosis Center - University of Washington Resource Report Resource Website |
Cystic Fibrosis Center - University of Washington (RRID:SCR_015401) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center that aims to provide resources and expertise to expedite development of potential new therapeutic approaches to correct dysfunctional CFTR and its secondary consequences, enhance understanding of evolving bacterial ecosystems and resultant host response in CF gastrointestinal and respiratory tracts, and how these interactions impact health. It also aims to develop improved assays, new drug screening assays, biomarkers and improved clinical outcome measures, as well as to better understand the metabolic and inflammatory consequences of CFTR dysfunction. | cftr therapy, cystic fibrosis translational research, cftr dysfunction |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Washington; Seattle; USA is parent organization of: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core is parent organization of: Cystic Fibrosis Center - University of Washington Host Response Core is parent organization of: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program is parent organization of: Cystic Fibrosis Center - University of Washington Microbiology Core is parent organization of: Cystic Fibrosis Center - University of Washington Clinical Core has organization facet: Cystic Fibrosis Center - University of Washington Clinical Core has organization facet: Cystic Fibrosis Center - University of Washington Microbiology Core has organization facet: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program has organization facet: Cystic Fibrosis Center - University of Washington Host Response Core has organization facet: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core is organization facet of: Cystic Fibrosis Research and Translation Centers |
Cystic Fibrosis | NIDDK P30DK089507 | Available to the research community | SCR_015401 | SciCrunch Registry | 2026-10-17 01:28:54 | 0 | ||||||||
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MMPC-University of Michigan Medical School Resource Report Resource Website 1+ mentions |
MMPC-University of Michigan Medical School (RRID:SCR_015373) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center which aims to contribute to a national database of metabolic phenotyping data in wild-type mouse strains and a broad range of mouse models relevant to the pathogenesis and treatment of diabetes, obesity and associated metabolic disorders. It also aims to foster continued technical development, refinement of assay sensitivity and specificity, data reproducibility, and transmission of best research practices within the areas of fundamental and applied diabetes and obesity research. | diabetes research center, obesity research center, mouse model research |
is listed by: NIDDK Information Network (dkNET) has parent organization: National Mouse Metabolic Phenotyping Centers has parent organization: University of Michigan; Ann Arbor; USA is parent organization of: MMPC-University of Michigan Medical School Microbiome Core is parent organization of: MMPC-University of Michigan Medical School Microvascular Complications Core is parent organization of: MMPC-University of Michigan Medical School Metabolism Bariatric Surgery and Behavior Core is parent organization of: MMPC-University of Michigan Medical School Animal Care and Germ-Free Mouse Core has organization facet: MMPC-University of Michigan Medical School Microbiome Core has organization facet: MMPC-University of Michigan Medical School Animal Care and Germ-Free Mouse Core has organization facet: MMPC-University of Michigan Medical School Metabolism Bariatric Surgery and Behavior Core has organization facet: MMPC-University of Michigan Medical School Microvascular Complications Core is organization facet of: National Mouse Metabolic Phenotyping Centers |
NIDDK U2C-DK110768 | Available to the research community, Acknowledgement requested | SCR_015373 | SciCrunch Registry | 2026-10-17 01:28:56 | 1 | |||||||||
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Harvard Digestive Disease Center Resource Report Resource Website |
Harvard Digestive Disease Center (RRID:SCR_015587) | HDDC | data or information resource, disease-related portal, organization portal, portal, topical portal | Community of scientists focused on the study of epithelial cell function and mucosal biology including inflammation and host defense of the gastrointestinal tract. It focuses on the intestinal and inflammatory bowel diseases; gut microbiology; and stem cell and developmental biology of the intestine and liver in organ physiology, regenerative medicine, and metabolism. | digestive disease, inflammatory bowel disease, epithelial cell function, mucosal biology, inflammation, stem cell biology |
is listed by: NIDDK Information Network (dkNET) has parent organization: Harvard University; Cambridge; United States is parent organization of: Harvard Digestive Diseases Center Biomedical CORE B: Microscopy and Histopathology is parent organization of: Harvard Digestive Diseases Center Biomedical CORE C: Epithelial Cell and Mucosal Immunology is parent organization of: Harvard Digestive Diseases Center Biomedical CORE D: Gnotobiotic Mice, Microbiology and Metagenomics is parent organization of: Harvard Digestive Diseases Center Clinical Translational Research Program is parent organization of: Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material has organization facet: Harvard Digestive Diseases Center Biomedical CORE B: Microscopy and Histopathology has organization facet: Harvard Digestive Diseases Center Biomedical CORE C: Epithelial Cell and Mucosal Immunology has organization facet: Harvard Digestive Diseases Center Biomedical CORE D: Gnotobiotic Mice, Microbiology and Metagenomics has organization facet: Harvard Digestive Diseases Center Clinical Translational Research Program has organization facet: Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material is organization facet of: Digestive Disease Centers |
digestive disease, Inflammatory Bowel Disease, | NIDDK P30 DK034854 | Available to the research community | SCR_015587 | SciCrunch Registry | 2026-10-17 01:28:58 | 0 | |||||||
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University of Pennsylvania Diabetes Research Center Resource Report Resource Website 1+ mentions |
University of Pennsylvania Diabetes Research Center (RRID:SCR_015732) | DRC | data or information resource, disease-related portal, portal, topical portal | NIDDK center that serves diabetes-oriented investigators from University of Pennsylvania as well as additional institutions from the mid-Atlantic region. The Penn DRC represents many basic science and clinical departments at Penn and the other institutions, and supports research in diabetes and obesity via Scientific Cores, a Pilot and Feasibility Grant Program, and a series of seminars, retreats, and other academic enrichment activities. | diabetes, research, univeristy of pennsylvania, upenn, obesity, metabolic disorder | is listed by: NIDDK Information Network (dkNET) | NIDDK P30DK19525 | Available to affiliated researchers | http://www.med.upenn.edu/, https://diabetescenters.org/ | SCR_015732 | SciCrunch Registry | 2026-10-17 01:28:56 | 1 | |||||||
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Stanford Diabetes Research Center Resource Report Resource Website 1+ mentions |
Stanford Diabetes Research Center (RRID:SCR_015856) | access service resource, service resource | University-affiliated center that promotes research in diabetes and related metabolic and endocrine disorders at Stanford University. | stanford, diabetes, research center, niddk, service resource |
is listed by: NIDDK Information Network (dkNET) is listed by: Diabetes Research Centers has organization facet: Stanford Diabetes Research Center Diabetes Immune Monitoring Core has organization facet: Stanford Diabetes Research Center Stanford Islet Research Core has organization facet: Stanford Diabetes Research Center Diabetes Clinical and Translational Core has organization facet: Stanford Diabetes Research Center Diabetes Genomics Analysis Core is organization facet of: Diabetes Research Centers |
NIDDK P30 DK116074 | Available to the scientific community | SCR_015856 | SciCrunch Registry | 2026-10-17 01:29:02 | 1 | |||||||||
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HIRN Consortium on Targeting and Regeneration Resource Report Resource Website |
HIRN Consortium on Targeting and Regeneration (RRID:SCR_016201) | HIRN-CTAR, CTAR, CTR, HIRN-CTR | consortium, data or information resource, organization portal, portal | Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is investigating methods to increase or maintain functional beta cell mass in T1D through targeted manipulation of islet plasticity or engineered protection of beta cells from immune-mediated destruction. | plasticity, bioengineering, cell, beta, cell, death | is organization facet of: Human Islet Research Network (HIRN) | NIDDK ; NIDDK U01 DK104162; NIDDK UC4 DK104119; NIDDK UC4 DK104143; NIDDK UC4 DK104204; NIDDK UC4 DK104209; NIDDK UC4 DK104211; NIDDK UC4 DK116241; NIDDK UC4 DK116252; NIDDK UC4 DK116255; NIDDK UC4 DK116264; NIDDK UC4 DK116280 |
SCR_016201 | SciCrunch Registry | Consortium on Targeting and Regeneration (HIRN-CTAR) | 2026-10-17 01:29:09 | 0 | ||||||||
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BioPlex Resource Report Resource Website 1000+ mentions |
BioPlex (RRID:SCR_016144) | data or information resource, data repository, database, service resource, storage service resource | Database of cell lines with each expressing a tagged version of a protein from the ORFeome collection. The overarching project goal is to determine protein interactions for every member of the collection. | cell, line, protein, immunopurification, mass, spectrometry, interaction, bio.tools, FASEB list |
is listed by: bio.tools is listed by: Debian has parent organization: Harvard Medical School; Massachusetts; USA |
Canadian Institutes for Health Research ; NHGRI U41HG006673; NIDDK K01 DK098285 |
PMID:28514442 | biotools:bioplex_2.0 | https://bio.tools/bioplex_2.0 | SCR_016144 | SciCrunch Registry | BioPlex (biophysical interactions of ORFeome-based complexes), Harvard BioPlex, Biophysical Interactions of Orfeome-based comPLEXes (BioPLEX) | 2026-10-17 01:29:02 | 1378 | ||||||
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HIRN Consortium on Human Islet Biomimetics Resource Report Resource Website |
HIRN Consortium on Human Islet Biomimetics (RRID:SCR_016199) | HIRN-CHIB, CHIB | consortium, data or information resource, organization portal, portal | Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is combining advances in beta cell biology and cell biology with tissue engineering technologies to develop microdevices that support functional human islets. | beta, cell, biology, tissue, bioengineering, nanoengineering, human, stem | is organization facet of: Human Islet Research Network (HIRN) | NIDDK ; NIDDK U01 DK104162; NIDDK UC4 DK104165; NIDDK UC4 DK104196; NIDDK UC4 DK104202; NIDDK UC4 DK104208; NIDDK UC4 DK116283 |
SCR_016199 | SciCrunch Registry | Consortium on Human Islet Biomimetics (HIRN-CHIB) | 2026-10-17 01:29:23 | 0 | ||||||||
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HIRN Consortium on Beta Cell Death and Survival Resource Report Resource Website |
HIRN Consortium on Beta Cell Death and Survival (RRID:SCR_016198) | HIRN-CBDS, CBDS | consortium, data or information resource, organization portal, portal | Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is using human tissues to discover highly specific biomarkers of beta cell injury in asymptomatic T1D and developing strategies to stop beta cell destruction early in the disease process. | kidney, tissue, biomarker, beta, cell, t1d, disease, research | is organization facet of: Human Islet Research Network (HIRN) | NIDDK ; NIDDK U01 DK104162; NIDDK UC4 DK104155; NIDDK UC4 DK104159; NIDDK UC4 DK104166; NIDDK UC4 DK104167; NIDDK UC4 DK104205; NIDDK UC4 DK104216; NIDDK UC4 DK108101; NIDDK UC4 DK108120; NIDDK UC4 DK108132; NIDDK UC4 DK116271; NIDDK UC4 DK116274; NIDDK UC4 DK116278 |
SCR_016198 | SciCrunch Registry | Consortium on Beta Cell Death and Survival (HIRN-CBDS) | 2026-10-17 01:29:04 | 0 | ||||||||
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HIRN Coordinating Center Resource Report Resource Website |
HIRN Coordinating Center (RRID:SCR_016395) | HIRN CC, HIRNCC | consortium, data or information resource, organization portal, portal | Consortium that provides infrastructure to promote communication and collaboration among current and future HIRN participants, facilitating scientific advances and the sharing of data, tools, and reagents among HIRN members and the research community at large. | coordination, hirn, human, islet, research, center, administration | is organization facet of: Human Islet Research Network (HIRN) | NIDDK U01 DK104162 | SCR_016395 | SciCrunch Registry | Human Islet Research Center Coordinating Center | 2026-10-17 01:29:12 | 0 | ||||||||
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RNA22 Resource Report Resource Website 100+ mentions |
RNA22 (RRID:SCR_016507) | RNA22 | data analysis software, data processing software, sequence analysis software, software application, software resource | Software tool as a pattern based algorithm for detecting microRNA binding sites and their corresponding microRNA and mRNA complexes. Allows interactive exploration and visualization of miRNA target predictions. Permits link-out to external expression repositories and databases. | pattern, based, detecting, microRNA, binding, site, complex, sequence, genome, analysis, FASEB list | is listed by: OMICtools | A Star ; Singapore ; NIDDK DK04763; NIH AI54973 |
Free, Available for download, Freely available | SCR_016507 | SciCrunch Registry | RiboNucleic Acid 22 | 2026-10-17 01:29:07 | 222 | |||||||
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TopDom Resource Report Resource Website 10+ mentions |
TopDom (RRID:SCR_016964) | TOPDOM | data analysis software, data processing software, software application, software resource, software toolkit | Software tool to identify Topological Domains, which are basic builiding blocks of genome structure. Detects topological domains in a linear time., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | identify, topological, domain, genome, structure, linear, time, data, analysis |
has parent organization: University of Southern California; Los Angeles; USA works with: CCTOP |
Arnold and Mabel Beckman foundation ; NHLBI U01 HL108634; NIDDK U54 DK107981; NSF CAREER 0747475; NSF CAREER 1150287; Pew Charitable Trusts |
PMID:26704975 | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_016964 | SciCrunch Registry | TOPological DOMains, Topological Domains, TopDom_v0.0.2, TopDom_v0.0.1 | 2026-10-17 01:29:20 | 11 | ||||||
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Prevention of Lower Urinary Tract Symptoms Resource Report Resource Website |
Prevention of Lower Urinary Tract Symptoms (RRID:SCR_016923) | PLUS | consortium, data or information resource, organization portal, portal | Research consortium from many different fields to plan, perform and analyze the studies that are needed to help researchers conduct future prevention and intervention for Lower Urinary Tract Symptoms (LUTS) in women. | plan, perform, analyze, data, prevent, lower, urinary, track, symptom, women |
is listed by: NIDDK Information Network (dkNET) is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology is related to: University of Minnesota Medical School; Minnesota; USA |
NIDDK | SCR_016923 | SciCrunch Registry | Prevention of Lower Urinary Tract Symptoms, Prevention LUTS, PLUS | 2026-10-17 01:29:19 | 0 | ||||||||
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Kidney Precision Medicine Project Resource Report Resource Website 50+ mentions |
Kidney Precision Medicine Project (RRID:SCR_016920) | KPMP | availability annotation standard, consortium, data or information resource, disease-related portal, narrative resource, nif annotation standard, organization portal, portal, project portal, standard specification, the community can contribute to this resource, topical portal | Project to ethically obtain and evaluate human kidney biopsies from participants with Acute Kidney Injury (AKI) or Chronic Kidney Disease (CKD), create a kidney tissue atlas, define disease subgroups, and identify critical cells, pathways, and targets for novel therapies. Used to develop the next generation of software tools to visualize and understand the various components of kidney diseases and to optimize data collection. Multi site collaboration comprised of patients, clinicians, and investigators from across the United States. | ethically, obtain, evaluate, human, kidney, biopsy, collaboration, patient, clinician, researcher, acute, injury, chronic, disease, tissue, atlas, cell, pathway, target, novel, therapy, data, collection |
is listed by: NIDDK Information Network (dkNET) is related to: Kidney Tissue Atlas |
Acute Kidney Injury, Chronic Kidney Disease | NIDDK | Open resource for academics, industry, and the broader scientific community | SCR_016920 | SciCrunch Registry | Kidney Precision Medicine Project, The Kidney Precision Medicine Project | 2026-10-17 01:29:11 | 72 | ||||||
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PICRUSt Resource Report Resource Website 10+ mentions |
PICRUSt (RRID:SCR_016855) | PICRUSt | simulation software, software application, software resource | Software package to predict metagenome functional content from marker gene (e.g., 16S rRNA) surveys and full genomes. Used to predict which gene families are present and then combines gene families to estimate the composite metagenome. | predict, metagenome, functional, content, DNA, sample, marker, gene, sequence, data, microbiome, 16S, RNA | is related to: PICRUSt2 | ARO W911NF1110473; Canada Research Chairs program ; Canadian Institutes of Health Research ; Crohn’s and Colitis Foundation of America ; Howard Hughes Medical Institute ; NHGRI R01 HG004872; NHGRI R01 HG005969; NHGRI U01 HG004866; NIDDK P01 DK078669; NSF CAREER DBI1053486; Sloan Foundation |
PMID:23975157 | Free, Available for download, Freely available | SCR_016856 | SCR_016855 | SciCrunch Registry | Phylogenetic Investigation of Communities by Reconstruction of Unobserved States, PICRUSt | 2026-10-17 01:29:18 | 45 | |||||
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ImmuneDB Resource Report Resource Website 1+ mentions |
ImmuneDB (RRID:SCR_017125) | analysis service resource, data analysis service, data or information resource, database, production service resource, service resource | Software system for storing and analyzing high throughput B and T cell immune receptor sequencing data. Comprised of web interface and of Python analysis tools to process raw reads for gene usage, infer clones, aggregate data, and run downstream analyses, or in conjunction with other AIRR tools using its import and export features. | collect, store, analysis, B cell, T cell, immune, receptor, sequencing, data, process, raw, read | is used by: AIRR Data Commons | NCI P30 CA016520; NIAID P01 AI106697; NIAID P30 AI0450080; NIDDK UC4 DK112217 |
PMID:30298069 | Free, Available for download, Freely available | https://github.com/arosenfeld/immunedb | SCR_017125 | SciCrunch Registry | 2026-10-17 01:29:39 | 8 |
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