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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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RodentJoystick Resource Report Resource Website |
RodentJoystick (RRID:SCR_023482) | data or information resource, portal, project portal | Project features single board real time input/output system including touch sensing joysticks to quantify mouse forelimb trajectories with micron millisecond spatiotemporal resolution, which resolves mouse forelimb kinematics and further allows extraction of primitives. Joystick increases spatial precision, and reduces displacement force. Joystick is then integrated into automated home cage system to train mice in center out reach task. | OpenBehavior, touch sensing joysticks, quantify mouse forelimb trajectories, micron millisecond spatiotemporal resolution, mouse forelimb kinematics, instrument | is listed by: OpenBehavior | PMID:30540551 | Free, Freely available | https://github.com/GoldbergLab/RodentJoystick/wiki | SCR_023482 | 2026-09-12 01:01:12 | 0 | ||||||||
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Dual port Lick Detector project Resource Report Resource Website |
Dual port Lick Detector project (RRID:SCR_021454) | data or information resource, instrument resource, portal, project portal | Project related to measuring licking behavior in mice.System includes device used for both real time measurement and manipulation of licking behavior in head fixed mice. System provides distribution package for Dual Port Lick Detector.Package includes files relevant to building lick detector. | Building lick detector files, lick detector, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: Dual Port Lick Detector |
DOI:10.1152/jn.00500.2018 | Free, Freely available | SCR_021454 | Dual port Lick Detector | 2026-09-12 01:00:22 | 0 | ||||||||
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Cerebro Wireless Optogenetic System project Resource Report Resource Website |
Cerebro Wireless Optogenetic System project (RRID:SCR_021474) | data or information resource, instrument resource, portal, project portal | Project related to wireless controlled optogenetic stimulation. Provides system for wireless optogenetic stimulation developed in Karpova Lab with ability to be customized.Features Cerebro,rechargeable, battery powered wireless receiver;head implant containing optical fibers and two independent laser diodes; base station for transmitting radio signals to Cerebro, controlled by Windows computer via USB or by TTL; charging dock; and Xavier, user friendly GUI for sending and logging base station commands. | Wireless optogenetic stimulation, Janelia open source hardware, Janelia open source software, Cerebro battery powered wireless receiver, head implant, Xavier, OpenBehavior, Instrument | is listed by: OpenBehavior | Free, Freely available | SCR_021474 | Cerebro Wireless Optogenetic System | 2026-09-12 01:00:22 | 0 | |||||||||
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4 Port Nose Poke Resource Report Resource Website |
4 Port Nose Poke (RRID:SCR_021592) | data or information resource, instrument resource, portal, project portal | Portal provides open source nose poke system utilizing Arduino microcontroller, several low cost electronic components, and PVC behavioral arena. System developed by University of Basel scientists for use in behavior experiments. | Instrument, motor behavior, behavioral arena, nose poke system, Arduino microcontroller, OpenBehavior |
is listed by: OpenBehavior has parent organization: University of Basel; Basel; Switzerland |
DOI:10.1016/j.mex.2016.04.002 | Free, Freely available | SCR_021592 | 2026-09-12 01:00:22 | 0 | |||||||||
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Open Source platform for Sensory Tasks project Resource Report Resource Website |
Open Source platform for Sensory Tasks project (RRID:SCR_021468) | data or information resource, instrument resource, portal, project portal | Project related to report animal decision in response to stimulus.Includes software tool as Arduino and Python based platform for Go or No Go sensory task to report animal decision in response to stimulus provided by University of Melbourne, Melbourne, VIC, Australia scientists. | Go or No Go sensory task, report animal decision, stimulus response, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.3389/fncel.2017.00156 | Free, Freely available | SCR_021468 | Open Source platform for Sensory Tasks | 2026-09-12 01:00:22 | 0 | ||||||||
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Waters: Andrew Pipetting Robot Resource Report Resource Website |
Waters: Andrew Pipetting Robot (RRID:SCR_022218) | instrument resource | Pipetting Robot offers repeatable, traceable pipetting with connected single and multichannel electronic pipettes. Enables automation of many routine sample preparation workflows. | instrument, equipment, USEDit, pipetting, single and multichannel electronic pipettes, routine sample preparation automation | is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility | https://www.waters.com/webassets/cms/library/docs/andrew_alliance_andrew+_brochure.pdf | SCR_022218 | Waters Andrew+ Pipetting Robot | 2026-09-12 01:00:23 | 0 | |||||||||
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Thermo Fisher: Exploris 240 LC/MS system Resource Report Resource Website 10+ mentions |
Thermo Fisher: Exploris 240 LC/MS system (RRID:SCR_022216) | instrument resource | Exploris 240 system is hybrid quadrupole Orbitrap mass spectrometer with Waters H-Class Acquity, ZipChip, and DART front ends. Flexible platform for wide range of small molecule and intact protein analyses. | instrument, equipment, hybrid quadrupole Orbitrap mass spectrometer, Waters H-Class Acquity, ZipChip, DART, small molecule, intact protein analyses | is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022216.pdf | Model_Number_Orbitrap_Exploris_240 | SCR_022216 | , Exploris 240 system, Thermo Scientific Orbitrap Exploris 240 LC/MS system | 2026-09-12 01:00:22 | 18 | ||||||||
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Thermo Fisher: Exploris 480 nanoLC/MS system Resource Report Resource Website 10+ mentions |
Thermo Fisher: Exploris 480 nanoLC/MS system (RRID:SCR_022215) | instrument resource | Exploris 480 system is hybrid quadrupole Orbitrap mass spectrometer with Waters M-Class Acquity. Proteomics system for hands on use by highly trained users. | instrument, equipment, hybrid quadrupole Orbitrap mass spectrometer, Waters M-Class Acquity, proteomics system |
uses: Thermo Fisher: Orbitrap Exploris 480 Mass Spectrometer is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility |
SCR_022215 | , Thermo Fisher Orbitrap Exploris 480 nanoLC/MS system with Waters M-Class Acquity, Exploris 480 system | 2026-09-12 01:00:22 | 12 | ||||||||||
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MRI Compatible Microdrive Resource Report Resource Website |
MRI Compatible Microdrive (RRID:SCR_022352) | data or information resource, instrument resource, portal, project portal | MRI compatible microdrive that can precisely position electrodes without causing significant imaging artifacts. | OpenBehavior, Instrument, device, microdrive, neural signal analysis, neural recording, electrical recording, electrode precisely positioning, MRI compatible equipment | is listed by: OpenBehavior | DOI:10.1523/ENEURO.0495-20.2021 | Free, Freely available | https://osf.io/tnpmk/ | SCR_022352 | 2026-09-12 01:00:25 | 0 | ||||||||
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Neonatal Stereotaxic Mouse Adaptor Resource Report Resource Website |
Neonatal Stereotaxic Mouse Adaptor (RRID:SCR_022349) | data or information resource, instrument resource, portal, project portal | 3D printed device for stereotaxic viral delivery into brains of neonatal mice.Used for stable and precise stereotaxic surgery in neonatal mice. | OpenBehavior, Instrument, 3D printed device, stable and precise 3D printed device for stable and precise stereotaxic surgery in neonatal mice, stereotaxic surgery, neonatal mice | is listed by: OpenBehavior | DOI:10.2144/btn-2020-0050 | Free, Freely available | SCR_022349 | 2026-09-12 01:00:25 | 0 | |||||||||
|
LED Matrix Stimuli Resource Report Resource Website |
LED Matrix Stimuli (RRID:SCR_022345) | data or information resource, instrument resource, portal, project portal | Open source device consists of three LED matrices that can be independently controlled via open source Arduino Uno microcontroller. Matrices of LEDs are mounted above nose pokes to examine perceptual decision making in rats. Highly modifiable LED matrices for visual stimulus presentation in behavioral studies.Designs for printing these accessory devices are available in GitHub account for the project. | OpenBehavior, Instrument, device, behavior apparatus, behavioral task, perceptual decision making in rats |
is listed by: OpenBehavior has parent organization: American University; Washington D.C.; USA |
DOI:10.1523/ENEURO.0563-20.2021 | Free, Freely available | https://github.com/LaubachLab/LED-matrices | SCR_022345 | 2026-09-12 01:00:25 | 0 | ||||||||
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Closed Loop Automated Reaching Apparatus Resource Report Resource Website 1+ mentions |
Closed Loop Automated Reaching Apparatus (RRID:SCR_022365) | CLARA | data or information resource, instrument resource, portal, project portal | Closed loop automated reaching apparatus for interrogating complex motor behaviors.Mechanical components include behavior box, series of cameras, and food pellet dispenser. Single workstation computer manages cameras, communicates with microcontroller, and analyzes mouse behavior in real time using modules extracted from DeepLabCut. Integrates fully automated, markerless kinematic tracking of multiple features to classify animal behavior and delivers neural stimulation based on behavioral outcomes. CLARA is compatible with advanced neurophysiological tools, enabling testing of neurostimulation devices and identification of novel neurological biomarkers.System fully automates trial initiation and pellet delivery and is capable of accurately delivering stimulation in response to trial outcome with short latency. | OpenBehavior, Instrument, interrogating complex motor behaviors apparatus, mouse behavior apparatus, markerless kinematic tracking, kinematic data, animal behavior, neural stimulation |
is listed by: OpenBehavior is related to: Behavioral Segmentation of Open-field in DeepLabCut has parent organization: University of Colorado School of Medicine; Colorado; USA |
DOI:10.1088/1741-2552/ac1ed1 | Free, Freely available | https://github.com/wryanw/CLARA_DLC | SCR_022365 | Closed Loop Automated Reaching Apparatus Project | 2026-09-12 01:00:25 | 1 | ||||||
|
COMPASS Resource Report Resource Website 100+ mentions |
COMPASS (RRID:SCR_022329) | data or information resource, instrument resource, portal, project portal | Non invasive, infrared activity and sleep measurement system that uses passive infrared sensors and Arduino microprocessor. Publication provides protocol for assembling COMPASS as well as provides support protocols and python scripts for data analysis, best practices for optimum results, troubleshooting, and alternative protocols for different use scenarios. | OpenBehavior, Instrument, behavior apparatus, behavior measurement, sleep tracking, infrared sensors, Arduino microprocessor | is listed by: OpenBehavior | DOI:10.1002/cpmo.81 | https://github.com/MRC-Harwell/sleep-tracking | SCR_022329 | Continuous Open Mouse Phenotyping of Activity and Sleep Status | 2026-09-12 01:00:24 | 265 | ||||||||
|
TetrODrive Resource Report Resource Website |
TetrODrive (RRID:SCR_022326) | data or information resource, instrument resource, portal, project portal | 3D printed microdrive for electrophysiology and optophysiology. Consists of main body and head. Used for in vivo tetrode recording, optical imaging, and optogenetic manipulation in freely moving mice.Design files and build instructions for this device can be found on TetrODrive GitHub.Microdrive can be assembled in 15 min and price for all materials, including 3D printer, is lower than single commercial microdrive. | OpenBehavior, Instrument, microdrive, behavior measurement, freely moving, neural recording, electrical recording, optical imaging, neural modulation, optogenetics | is listed by: OpenBehavior | DOI:10.1088/1741-2552/abf608 | Free, Freely available | https://github.com/MarcelMB/TetrODrive | SCR_022326 | 2026-09-12 01:00:24 | 0 | ||||||||
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Florida research open source synchronization tool Resource Report Resource Website |
Florida research open source synchronization tool (RRID:SCR_022344) | FROST | data or information resource, instrument resource, portal, project portal | Open source system built around Arduino based microcontroller for analog and digital input and synchronization combined with custom printed circuit board. Hardware and Arduino-based firmware used to synchronize experimental and electrophysiological data. | OpenBehavior, Instrument, device, synchronization tool, electrophysiology experiments, neural signal analysis, neural recording, electrical recording, synchronizing experimental and electrophysiological data. |
is listed by: OpenBehavior has parent organization: University of Florida; Florida; USA |
DOI:10.1016/j.jneumeth.2020.108800 | Free, Freely available | https://github.com/Brain-Mapping-Lab/FROST | SCR_022344 | FROST project | 2026-09-12 01:00:25 | 0 | ||||||
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pyOS-5 project Resource Report Resource Website |
pyOS-5 project (RRID:SCR_022335) | data or information resource, instrument resource, portal, project portal | Open source operant box system optimized for use with tethered animals. System includes hardware and software. Control electronics are build on pyControl, controlling custom PCB integrating 5 infra-red break-beam sensors and 5 stimulus LEDs, single nose-poke for reward receptacle, stepper motor for control of custom peristaltic pump for reward delivery, audio board for tone generation through attached speaker, house light and fan, LED driver for optogenetic stimulation, and bidirectional communication with external devices via TTL pulses. | OpenBehavior, Instrument, operant box system, tethered animals, behavior apparatus, neurophysiology |
is listed by: OpenBehavior is related to: pyOS-5 |
DOI:10.1038/s41598-021-01717-1 | Free, Freely available | SCR_022335 | Python based operant box system in 5-choice design, pyOS-5 | 2026-09-12 01:00:25 | 0 | ||||||||
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LED Zappelin’ Resource Report Resource Website 1+ mentions |
LED Zappelin’ (RRID:SCR_022560) | data or information resource, portal, topical portal | Open source LED controller for arbitrary spectrum visual stimulation and optogenetics during 2 photon imaging. Device that rapidly time interleaves stimulation and detection epochs during two photon imaging. | Instrument, OpenBehavior, LED controller, arbitrary spectrum visual stimulation, optogenetics, two photon imaging, stimulation and detection, behavioral neuroscience |
is listed by: OpenBehavior has parent organization: University of Sussex; Brighton; United Kingdom |
PMID:35498254 | Free, Freely available | https://edspace.american.edu/openbehavior/project/led-zappelin/ | SCR_022560 | 2026-09-12 01:00:27 | 1 | ||||||||
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BD Biosciences: FACSymphony A5 Cell Analyzer Resource Report Resource Website 10+ mentions |
BD Biosciences: FACSymphony A5 Cell Analyzer (RRID:SCR_022538) | instrument resource | Flow cytometer as novel cell analyzer that leverages inherent benefits of flow cytometry and enables simultaneous measurement of up to 50 different characteristics of single cell. | Flow cytometer, cell analyzer, simultaneous measurement, instrument, equipment, USEDit | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022538.pdf | Model_Number_FACSymphony_A5 | SCR_022538 | BD FACSymphony A5 | 2026-09-12 01:00:26 | 15 | ||||||||
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Hamamatsu: NanoZoomer S60 Digital slide scanner Resource Report Resource Website 10+ mentions |
Hamamatsu: NanoZoomer S60 Digital slide scanner (RRID:SCR_022537) | instrument resource | Whole slide scanner that scan glass slides to convert them to digital data. NanoZoomer S60 supports both brightfield imaging, fluorescence imaging and double size slides. | Whole slide scanner, scan glass slides, convertion to digital data, instrument, equipment, USEDit | is listed by: USEDit | Restricted | Model_Number_NanoZoomer_S60 | SCR_022537 | NanoZoomer S60 Digital slide scanner | 2026-09-12 01:00:26 | 15 | ||||||||
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USVCAM Resource Report Resource Website |
USVCAM (RRID:SCR_022747) | data or information resource, instrument resource, portal, project portal | Open source acoustic camera system for measuring ultrasound communication in rodents. System includes small phased microphone array combined with camera and comprises USV segmentation algorithms with modification for overlapping vocalizations that results in high accuracy. Enables simpler and faster USV localization and assignment. | OpenBehavior, instrument, acoustic camera system, measuring ultrasound communication in rodents |
is listed by: OpenBehavior has parent organization: University of Toyama; Toyama; Japan |
PMID:35982786 | Free, Freely available | https://edspace.american.edu/openbehavior/?s=USVCAM | SCR_022747 | USVCAM project, ultrasonic vocalizations camera | 2026-09-12 01:00:28 | 0 |
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