Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Keywords:genomic (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

828 Results - per page

Show More Columns | Download 828 Result(s)

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
GeneCards
 
Resource Report
Resource Website
5000+ mentions
GeneCards (RRID:SCR_002773) GeneCards data or information resource, database Database of human genes that provides concise genomic, proteomic, transcriptomic, genetic and functional information on all known and predicted human genes. Information featured in GeneCards includes orthologies, disease relationships, mutations and SNPs, gene expression, gene function, pathways, protein-protein interactions, related drugs and compounds and direct links to cutting edge research reagents and tools such as antibodies, recombinant proteins, clones, expression assays and RNAi reagents. genome, human gene, genome, gene, genomic, proteomic, transcriptomic, genetic, function, ortholog, disease, mutation, single nucleotide polymorphism, gene expression, gene function, pathway, protein-protein interaction, drug, compound, reagent, antibody, recombinant protein, clone, expression assay, rnai reagent, FASEB list is listed by: OMICtools
is related to: MOPED - Model Organism Protein Expression Database
PMID:20689021 Free, Freely available nif-0000-02879, OMICS_01652, r3d100012015 http://bioinfo.weizmann.ac.il/genecards/, https://doi.org/10.17616/R3D643 SCR_002773 GeneCards - The Human Gene Compendium 2026-09-12 01:01:26 7635
Zebrafish Information Network (ZFIN)
 
Resource Report
Resource Website
500+ mentions
Zebrafish Information Network (ZFIN) (RRID:SCR_002560) ZFIN data or information resource, database Model organism database that serves as central repository and web-based resource for zebrafish genetic, genomic, phenotypic and developmental data. Data represented are derived from three primary sources: curation of zebrafish publications, individual research laboratories and collaborations with bioinformatics organizations. Data formats include text, images and graphical representations.Serves as primary community database resource for laboratory use of zebrafish. Developed and supports integrated zebrafish genetic, genomic, developmental and physiological information and link this information extensively to corresponding data in other model organism and human databases. expression, gene, anatomy, development, disease, genomic, model, molecular, mutant, neuronal, organism, phenotype, physiological, synteny, zebrafish, gene expression, genome sequence, molecular neuroanatomy resource, genotype, anatomical structure, publication, genome, image collection, gold standard, bio.tools, FASEB list, RRID Community Authority uses: InterMOD
is used by: NIF Data Federation
is used by: Resource Identification Portal
is used by: Morpholino Database
is used by: Integrated Animals
is used by: NIH Heal Project
is recommended by: Resource Identification Portal
is recommended by: NIDDK Information Network (dkNET)
is recommended by: National Library of Medicine
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
is listed by: OMICtools
is listed by: InterMOD
is listed by: re3data.org
is listed by: bio.tools
is listed by: Debian
is related to: AmiGO
is related to: Phenoscape Knowledgebase
is related to: MONARCH Initiative
is related to: Bgee: dataBase for Gene Expression Evolution
is related to: NIH Data Sharing Repositories
is related to: HomoloGene
is related to: Zebrafish International Resource Center
is related to: Integrated Manually Extracted Annotation
is related to: Zebrafish Genome Project
has parent organization: University of Oregon; Oregon; USA
is parent organization of: ZFIN Antibody Database
is parent organization of: Zebrafish Anatomical Ontology
is parent organization of: ZFIN Protocol Wiki
is parent organization of: ZFIN Antibody Wiki
is organization facet of: Alliance of Genome Resources
NHGRI P41 HG002659;
NHGRI R01 HG004834
PMID:23074187
PMID:21036866
PMID:16381936
Free, Available for download, Freely available OMICS_01666, nif-0000-21427, biotools:zfin, r3d100010421, SCR_017504 http://zfin.org/ZFIN/misc_html/tips.html#newrecord, https://wiki.zfin.org/display/general/ZFIN+Data+Submissions, https://bio.tools/zfin, https://doi.org/10.17616/R3CK5Z SCR_002560 Zebrafish Database, The Zebrafish Model Organism Database, Zebra Model Organism Database, ZebraFish Information Network, ZFIN 2026-09-12 01:01:26 978
object-oriented Transcription Factors Database
 
Resource Report
Resource Website
1+ mentions
object-oriented Transcription Factors Database (RRID:SCR_002435) data or information resource, database ooTFD (object-oriented Transcription Factors Database) is a successor to TFD, the original Transcription Factors Database. This database is aimed at capturing information regarding the polypeptide interactions which comprise and define the properties of transcription factors. ooTFD contains information about transcription factor binding sites, as well as composite relationships within transcription factors, which frequently occur as multisubunit proteins that form a complex interface to cellular processes outside the transcription machinery through protein-protein interactions. ooTFD contains information represented in TFD but also allows the representation of containment, composite, and interaction relationships between transcription factor polypeptides. It is designed to represent information about all transcription factors, both eukaryotic and prokaryotic, basal as well as regulatory factors, and multiprotein complexes as well as monomers. eukaryotic, expression, factor, gene, basal, binding site, biochemical, biology, cellular, complex, genome, genomic, information, interaction, molecule, monomer, multisubunit, nucleotide sequences, transcriptional regulator sites, transcription factors, object, polypeptide, process, prokaryotic, property, protein, protein-protein interaction, regulatory, sequence, transcription has parent organization: IFTI-Mirage PMID:10592257
PMID:9847215
PMID:9399874
Free, Freely available nif-0000-21303 SCR_002435 ooTFD 2026-09-12 01:01:25 2
Evolutionary Lineage Inferred from Structural Analysis
 
Resource Report
Resource Website
1+ mentions
Evolutionary Lineage Inferred from Structural Analysis (RRID:SCR_002343) data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE, documented August 23, 2016. ELISA is an online database that combines functional annotation with structure and sequence homology modeling to place proteins into sequence-structure-function neighborhoods. The atomic unit of the database is a set of sequences and structural templates that those sequences encode. A graph that is built from the structural comparison of these templates is called PDUG (protein domain universe graph). It introduces a method of functional inference through a probabilistic calculation done on an arbitrary set of PDUG nodes. Further, all PDUG structures are mapped onto all fully sequenced proteomes allowing an easy interface for evolutionary analysis and research into comparative proteomics. ELISA is the first database with applicability to evolutionary structural genomics explicitly in mind. evolutionary, function, functional, analysis, annotation, atomic unit, calculation, comparative, domain, genomic, homology, modeling, place, probabilistic, protein, protein domain and protein classification databases, proteome, proteomic, sequence, structural, structure, template has parent organization: Boston University; Massachusetts; USA PMID:12952559 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-21141 SCR_002343 ELISA 2026-09-12 01:01:25 1
Database of Transcribed Sequences
 
Resource Report
Resource Website
10+ mentions
Database of Transcribed Sequences (RRID:SCR_002334) data or information resource, database DoTS (Database Of Transcribed Sequences) is a human and mouse transcript index created from all publicly available transcript sequences. The input sequences are clustered and assembled to form the DoTS Consensus Transcripts that comprise the index. These transcripts are assigned stable identifiers of the form DT.123456 (and are often referred to as dots). The transcripts are in turn clustered to form putative DoTS Genes. These are assigned stable identifiers of the form DG.1234356. As of September 1, 2004, the DoTS annotation team has manually annotated 43,164 human and 78,054 mouse DoTS Transcripts (DTs), corresponding to 3,939 human and 7,752 mouse DoTS Genes (DGs). Use the manually annotated gene query to see the DoTS Transcripts that have been manually annotated. The focus of the DoTS project is integrating the various types of data (e.g., EST sequences, genomic sequence, expression data, functional annotation) in a structured manner which facilitates sophisticated queries that are otherwise not easy to perform. DoTS is built on the GUS Platform which includes a relational database that uses controlled vocabularies and ontologies to ensure that biologically meaningful queries can be posed in a uniform fashion. An easy way to start using the site is to search for DoTS Transcripts using an existing cDNA or mRNA sequence. Click on the BLAST tab at the top of the page and enter your sequence in the form provided. All the transcripts with significant sequence similarity to your query sequence will be displayed. Or use one of the provided queries to retrieve transcripts using a number of criteria. These queries are listed on the query page, which can also be reached by clicking on the tab marked query at the top of the page. Finally, the boolean query page allows these queries to be combined in a variety of ways. Sponsors: Funding provided by -NIH grant RO1-HG-01539-03 -DOE grant DE-FG02-00ER62893 expression, functional, gene, annotation, biological, cdna, genomic, human, index, model organisms and comparative genomics databases, mouse, mrna, sequence, structure, transcribed, transcript has parent organization: University of Pennsylvania; Philadelphia; USA nif-0000-21125 SCR_002334 DoTs 2026-09-12 01:01:25 15
Human Experimental/FunctionAL MaPper: Providing Functional Maps of the Human Genome
 
Resource Report
Resource Website
Human Experimental/FunctionAL MaPper: Providing Functional Maps of the Human Genome (RRID:SCR_003506) HEFalMp data or information resource, database, service resource HEFalMp (Human Experimental/FunctionAL MaPper) is a tool developed by Curtis Huttenhower in Olga Troyanskaya's lab at Princeton University. It was created to allow interactive exploration of functional maps. Functional mapping analyzes portions of these networks related to user-specified groups of genes and biological processes and displays the results as probabilities (for individual genes), functional association p-values (for groups of genes), or graphically (as an interaction network). HEFalMp contains information from roughly 15,000 microarray conditions, over 15,000 publications on genetic and physical protein interactions, and several types of DNA and protein sequence analyses and allows the exploration of over 200 H. sapiens process-specific functional relationship networks, including a global, process-independent network capturing the most general functional relationships. Looking to download functional maps? Keep an eye on the bottom of each page of results: every functional map of any kind is generated with a Download link at the bottom right. Most functional maps are provided as tab-delimited text to simplify downstream processing; graphical interaction networks are provided as Support Vector Graphics files, which can be viewed using the Adobe Viewer, any recent version of Firefox, or the excellent open source Inkscape tool. human, map, gene, functional, pathway, disease, genomic, analysis, microarray, dna, protein, sequence has parent organization: Princeton University; New Jersey; USA New Jersey Commission on Cancer Research ;
PhRMA Foundation 2007RSGl9572;
NIGMS R01 GM071966;
NSF DBI-0546275;
NSF IIS-0513552;
NHGRI T32 HG003284;
NIGMS P50 GM071508
PMID:19246570 nif-0000-37186 SCR_003506 Human Experimental / FunctionAL MaPper, Human Experimental/FunctionAL MaPper 2026-09-12 01:01:29 0
Hapmix
 
Resource Report
Resource Website
50+ mentions
Hapmix (RRID:SCR_004203) HAPMIX software application, software resource, source code Software application that uses genotyping data from SNP arrays for accurately inferring chromosomal segments of distinct continental ancestry in admixed populations, using dense genetic data. (entry from Genetic Analysis Software) gene, genetic, genomic, admixed, population, genotype, single nucleotide polymorphism, ancestry, chromosomal segment, snp array is listed by: OMICtools
is listed by: Genetic Analysis Software
has parent organization: Harvard Medical School; Massachusetts; USA
NHGRI U01-HG004168;
NHLBI R01-HL087699
PMID:19543370 Restricted nlx_22768, OMICS_02082 http://www.hsph.harvard.edu/faculty/alkes-price/software/, http://www.stats.ox.ac.uk/~myers/software.html, https://reich.hms.harvard.edu/software http://genetics.med.harvard.edu/reich/Reich_Lab/Software.html SCR_004203 2026-09-12 01:01:30 52
Hungarian Neurological-Psychiatric Biobank
 
Resource Report
Resource Website
Hungarian Neurological-Psychiatric Biobank (RRID:SCR_003715) NEPSYBANK biomaterial supply resource, material resource, tissue bank The Hungarian Society of Clinical Neurgenetics established a nationwide collaboration for prospective collection of human biological materials and databases from patient with neurological and psychiatric diseases. The basic triangle of the NEPSYBANK is the sample, the information and the study management. The present participants of the NEPSYBANK are the Department of Neurology and Psychiatry of the four Medical Universities (in Budapest, Debrecen, Pecs, Szeged) and the National Institute of Psychiatry and Neurology in Budapest. The NEPSYBANK is a disease based biobank collecting both phenotypical and environmental data and biological materials such as DNA/RNA, whole blood, plasma, cerebral spinal fluid, muscle / nerve / skin biopsy, brain, and fibroblast. The target of the diseases is presently (Phase I): stroke syndromes, dementias, movement disorders, motoneuron diseases, epilepsy, multiple sclerosis, schizophrenia, alcohol addiction. In the near future (Phase II.) it is planned to enlarge the scale with headaches, disorders of the peripheral nerves, disorders of neuromuscular transmission, disorders of skeletal muscle, depression, anxiety. DNA/RNA is usually extracted from whole blood, but occasionally different tissues such as muscle, brain etc. can be used as well. The extracting procedures differ among the institutes, but in all cases the concentration and the quality of the DNA/RNA must be registered in the database. Participating institutional biobanks have committed themselves to follow common quality standards, which provide access to samples after prioritization on scientific grounds only. In every case the following data are registered. 1. General data: main bank categories, age, sex, ethnicity, body height, body weight, economic stats, education, type of place of living, marital status, birth complications, alcohol, drugs, smoking. 2. Sample properties (sample ID, type of sample, date of extraction, concentration, and level of purity). General patient data as blood pressure, heart rate, internal medical status, ECG, additional diseases. Disease specific question e.g. in schizophrenia the diagnosis after DSMIV and ICD 10, detailed diagnostic questions after both classification, detailed psychiatric and neurological status, laboratory findings, rating scales, data of neuroimaging, genetic tests, applied medication (with generic name, dose, duration), adverse drug effects and other treatments. The Biobank Information Management System (BIMS) is responsible for linkage of databases containing information on the individual sample donors. If you want to have samples from the NEPSYBANK an application must be submitted containing the following information: short research plan including aims and study design, ethic application with a positive decision, specific demands regarding the right of disposition, agreements with grant organizations which regulate immaterial property, information about financing (academic grants, support from industry). All participants have the right to withdraw their samples through a simple order. neurology, psychiatry, genomic, gene, genetic, disease, phenotype, clinical data, environment, dna, rna, whole blood, plasma, cerebral spinal fluid, muscle, biopsy, nerve, skin, brain, fibroblast, tissue, blood, frozen, liquid nitrogen, neurological disease, psychiatric disease, stroke, dementia, movement disorder, motor neuron disease, epilepsy, multiple sclerosis, schizophrenia, alcohol, addiction, alcohol addiction, headache, peripheral nerve disorder, neuromuscular transmission disorder, skeletal muscle disorder, depressive disorder, anxiety is listed by: One Mind Biospecimen Bank Listing Neurological disease, Psychiatric disease, Stroke, Dementia, Movement disorder, Motor Neuron Disease, Epilepsy, Multiple Sclerosis, Schizophrenia, Alcohol addiction, Headache, Peripheral nerve disorder, Neuromuscular transmission disorder, Skeletal muscle disorder, Depressive Disorder, Anxiety PMID:17448454 Public: if you want to have samples from the NEPSYBANK an application must be submitted. nlx_13478 SCR_003715 Hungarian Neurological - Psychiatric Biobank, Hungarian Neurological - Psychiatric Biobank - NEPSYBANK 2026-09-12 01:01:29 0
Stanley Medical Research Institute Online Genomics Database
 
Resource Report
Resource Website
10+ mentions
Stanley Medical Research Institute Online Genomics Database (RRID:SCR_004859) Stanley Online Genomics Database data or information resource, database The Stanley Online Genomics Database uses samples from the Stanley Medical Research Institute (SMRI) Brain Bank. These samples were processed and run on gene expression arrays by a variety of researchers in collaboration with the SMRI. These researchers have performed analyses on their respective studies using a range of analytic approaches. All of the genomic data have been aggregated in this online database, and a consistent set of analyses have been applied to each study. Additionally, a comprehensive set of cross-study analyses have been performed. A thorough collection of gene expression summaries are provided, inclusive of patient demographics, disease subclasses, regulated biological pathways, and functional classifications. Raw data is also available to download. The database is derived from two sets of brain samples, the Stanley Array collection and the Stanley Consortium collection. The Stanley Array collection contains 105 patients, and the Stanley Consortium collection contains 60 patients. Multiple genomic studies have been conducted using these brain samples. From these studies, twelve were selected for inclusion in the database on the basis of number of patients studied, genomic platform used, and data quality. The Consortium collection studies have fewer patients but more diversity in brain regions and array platforms, while the Array collection studies are more homogenous. There are tradeoffs, the Consortium results will be more variable, but findings may be more broadly representative. The collections contain brain samples from subjects in four main groups: Bipolar Schizophrenia, Depression, and Controls Brain regions used in the studies include: Broadman Area 6, Broadman Area 8/9, Broadman Area 10, Broadman Area 46, Cerebellum The 12 studies encompass a range of microarray platforms: Affymetrix HG-U95Av2, Affymetrix HG-U133A, Affymetrix HG-U133 2.0+, Codelink Human 20K, Agilent Human I, Custom cDNA Publications based on any of the clinical or genomic data should credit the Stanley Medical Research Institute, as well as any individual SMRI collaborators whose data is being used. Publications which make use of analytic results/methods in the database should additionally cite Dr. Michael Elashoff. Registration is required to access the data. clinical, genomic, gene expression, microarray, bipolar disorder, schizophrenia, depressive disorder, control, brain, brodmann area 6, brodmann area 8, brodmann area 9, brodmann (1909) area 10, brodmann area 46, cerebellum, FASEB list has parent organization: Stanley Medical Research Institute PMID:16594998 nlx_143935 SCR_004859 SMRI Online Genomics Database 2026-09-12 01:01:34 33
Oncotator
 
Resource Report
Resource Website
100+ mentions
Oncotator (RRID:SCR_005183) Oncotator analysis service resource, data analysis service, production service resource, service resource A tool for annotating human genomic point mutations and indels with data relevant to cancer researchers. Genomic Annotations, Protein Annotations, and Cancer Annotations are aggregated from many resources. A standalone version of Oncotator is being developed. annotate, genomic, point mutation, indel, mutation, genome, protein, variant is listed by: OMICtools
has parent organization: Broad Institute
Cancer OMICS_00178 SCR_005183 2026-09-12 01:01:36 223
University of California Los Angeles Technology Center for Genomics and Bioinformatics Core Facility
 
Resource Report
Resource Website
1+ mentions
University of California Los Angeles Technology Center for Genomics and Bioinformatics Core Facility (RRID:SCR_012204) TCGB, UCLA TCGB, access service resource, core facility, service resource Core is a fully automated, high-throughput genomic Center equipped with next generation sequencing and microarray platforms. TCGB provides genomics technologies, comprehensive services, specialized expertise and a wide range of trainings, enabling these services to serve basic science and translational/clinical research. In addition, TCGB provides pre-experiment consultation and post-experiment support, including preparation of grant applications, publications, and strategic planning for additional research steps. TCGB also provides educational training to faculty, staff, and students to raise awareness of new directions and major discoveries in the areas of genomics and bioinformatics. training, genomic, next generation sequencing, microarray platforms, is listed by: ScienceExchange
is related to: University of California Los Angeles Labs and Facilities
has parent organization: University of California at Los Angeles; California; USA
Open SciEx_10586 http://www.scienceexchange.com/facilities/clinical-microarray-core-ucla http://pathology.ucla.edu/tcgb SCR_012204 University of California Los Angeles, University of California Los Angeles Technology Center for Genomics & Bioinformatics 2026-09-12 01:03:38 5
DFCI Center for Cancer Computational Biology
 
Resource Report
Resource Website
DFCI Center for Cancer Computational Biology (RRID:SCR_012688) DFCI CCCB access service resource, core facility, service resource Core facility that provides the following services: Microarray and other genomic data analysis, MiSeq. The Center provides broad-based support for the generation, analysis, and interpretation of genomic and other large-scale data in the context of basic, clinical and translational research. The CCCB has three primary elements. * The CCCB sequencing facility offers a wide range of services to assist in the design and execution of next-generation sequencing projects. Utilizing the Illumina (Solexa) sequencing technology, they currently support a number of applications inlcuding ChIP-Seq, RNA-Seq, whole genome, whole exome, and targeted re-sequencing. * The analytical services and support platform aims to provide state-of-the-art assistance in the collection, management, analysis, and interpretation of large-scale data with a focus on data generated using ''''omic technologies. In addition, they offer software, services, and training designed to assist investigators in advancing their research. * The CCCB research program is focused on development of new methods for improving analysis and interpretation of genomic data through integration of diverse data types with the goal of creating open-source software tools to be made freely-available to the research community. nucleic acid microarray assay, next generation sequencing, genome, genomic, microarray is listed by: ScienceExchange
is listed by: Eagle I
is related to: Dana-Farber Cancer Institute Labs and Facilities
has parent organization: Dana-Farber Cancer Institute
Cancer SciEx_8878 http://harvard.eagle-i.net/i/0000012e-59a5-5f86-55da-381e80000000, http://www.scienceexchange.com/facilities/center-for-cancer-computational-biology-cccb-harvard SCR_012688 Dana-Farber Cancer Institute Center for Cancer Computational Biology, DFCI Center for Cancer Computational Biology (CCCB) 2026-09-12 01:03:45 0
PROFILER
 
Resource Report
Resource Website
1000+ mentions
PROFILER (RRID:SCR_009339) PROFILER software application, software resource A flexible software tool to generate the probability distribution of joint multilocus genotypes defined by sets of individuals within the pedigree and sets of markers within the framework map. (entry from Genetic Analysis Software), THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. gene, genetic, genomic, linux, unix, solaris is listed by: Genetic Analysis Software
is listed by: SoftCite
THIS RESOURCE IS NO LONGER IN SERVICE nlx_154552 SCR_009339 2026-09-12 01:02:44 1295
PREPLINK
 
Resource Report
Resource Website
PREPLINK (RRID:SCR_009335) PREPLINK software application, software resource Software application that is part of the LINKAGE auxiliary program (entry from Genetic Analysis Software) gene, genetic, genomic, c and pascal, unix, vms, ms-dos, os2 is listed by: Genetic Analysis Software nlx_154547 SCR_009335 MAKE PEDfiles 2026-09-12 01:02:44 0
PREST
 
Resource Report
Resource Website
10+ mentions
PREST (RRID:SCR_009336) PREST software application, software resource Software program that detects pedigree errors in general outbred pedigrees by use of genome-screen data. When a potential pedigree error is detected, our companion program, ALTERTEST, determines which relationships are compatible with the observed genotype data. Both programs are freely available on the web. (entry from Genetic Analysis Software) gene, genetic, genomic, c, linux, unix, solaris is listed by: Genetic Analysis Software nlx_154548 SCR_009336 Pedigree RElationship Statistical Test 2026-09-12 01:02:44 11
POWTEST
 
Resource Report
Resource Website
POWTEST (RRID:SCR_009334) POWTEST software application, software resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 16,2023. Excel spreadsheet to calculate power of affected sibpairs and TDT analyses (entry from Genetic Analysis Software) gene, genetic, genomic is listed by: Genetic Analysis Software THIS RESOURCE IS NO LONGER IN SERVICE nlx_154546 SCR_009334 2026-09-12 01:02:44 0
POOL STR
 
Resource Report
Resource Website
POOL STR (RRID:SCR_009331) POOL_STR software application, software resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 16,2023. Software application (entry from Genetic Analysis Software), THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. gene, genetic, genomic is listed by: Genetic Analysis Software THIS RESOURCE IS NO LONGER IN SERVICE nlx_154541 SCR_009331 POOLing alleles of Short Tandem Repeat markers 2026-09-12 01:02:44 0
MLR-TAGGING
 
Resource Report
Resource Website
MLR-TAGGING (RRID:SCR_009299) MLR-TAGGING software application, software resource Software application that can be used for tagging SNP selection and genotype prediction (entry from Genetic Analysis Software) gene, genetic, genomic is listed by: Genetic Analysis Software nlx_154490 SCR_009299 Multivariate Linear Regression TAGGING 2026-09-12 01:02:44 0
POWERMARKER
 
Resource Report
Resource Website
500+ mentions
POWERMARKER (RRID:SCR_009332) POWERMARKER software application, software resource A comprehensive set of statistical methods for genetic marker data analysis, designed especially for SSR/SNP data analysis. PowerMarker builds a powerful user interface around both new and traditional statistical methods for population genetic analysis. See analysis to check out the versatility of PowerMarker. PowerMarker is also a 2D Viewer - which was used intensively for visualizing linkage disequilibria results. (entry from Genetic Analysis Software) gene, genetic, genomic is listed by: Genetic Analysis Software nlx_154544 SCR_009332 2026-09-12 01:02:44 639
MMDRAWER
 
Resource Report
Resource Website
MMDRAWER (RRID:SCR_009296) MMDRAWER software application, software resource Software application to draw chromosome maps from the output of MAPMAKER/EXP. The output format is a Enhanced Metafile, which can be imported into most Windows-based presentation or document editing programs. (entry from Genetic Analysis Software) gene, genetic, genomic, delphi, ms-windows is listed by: Genetic Analysis Software nlx_154487 SCR_009296 2026-09-12 01:02:44 0

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. Neuroscience Information Framework Resources

    Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.