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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Voluntary Access Static Incapacitance Chamber project
 
Resource Report
Resource Website
1+ mentions
Voluntary Access Static Incapacitance Chamber project (RRID:SCR_021458) VASIC data or information resource, instrument resource, portal, project portal Project related to assessment of pain in animal models.Provided system includes weight bearing device for high throughput and unbiased behavioral pain assessment in rodents.Includes custom printed circuit board, infrared sensor, Arduino microcontroller, 3D printed parts, and open source software for analysis. Weight bearing, behavioral pain assessment, rodent pain assessment, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1016/j.ohx.2018.e00031 Free, Freely available SCR_021458 Voluntary Access Static Incapacitance Chamber 2026-09-12 12:59:56 1
ArduiPod Box project
 
Resource Report
Resource Website
ArduiPod Box project (RRID:SCR_021466) data or information resource, instrument resource, portal, project portal Project related to presenting visual and auditory stimuli, recording behavior in form of nose pokes or screen touches, and delivering liquid rewards. ProvidesOperant chamber built with iPod Touch and Arduino microcontroller as main components. Operant conditioning chamber, visual stimuli presentation, auditory stimuli presentation, record behavior, nose pokes, screen touches, deliver liquid reward, OpenBehavior, Instrument is listed by: OpenBehavior DOI:0.3758/s13428-013-0367-5 Free, Freely available SCR_021466 ArduiPod Box 2026-09-12 12:59:56 0
Joystick project
 
Resource Report
Resource Website
Joystick project (RRID:SCR_021442) data or information resource, instrument resource, portal, project portal Project related to studying motor behavior and decision making in mice. Open source behavior training platform for studying motor control, decision making, and reaching reaction time. Enables behavioral work to study unexplored features of action selection, motivation, and value based decisions. Motor control, decision making, reaction time, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1523/eneuro.0523-19.2020 Free, Freely available SCR_021442 Joystick 2026-09-12 12:59:55 0
Catalepsy Bar project
 
Resource Report
Resource Website
Catalepsy Bar project (RRID:SCR_021439) data or information resource, instrument resource, portal, project portal Project related to measuring of muscular rigidity that can result from several factors including Parkinsons disease, or pharmacological exposure to antipsychotics or cannabis. Provides automated apparatus for measuring catalepsy that increases measurement accuracy and reduces observer bias.Catalepsy bar test automatically measures and records time it takes for rat to remove its forelimbs from bar. 3D printed test apparatus used to make catalepsy measurements in rats more standardized and accurate. Automated apparatus, measuring catalepsy, measurement accuracy, observer bias reduction, catalepsy bar test, automatically records time, remove forelimbs from bar, rat, OpenBehavior, Instrument is listed by: OpenBehavior
has parent organization: University of Guelph; Ontario; Canada
DOI:10.1523/eneuro.0488-19.2020 Free, Available for download, Freely available https://www.khokharlab.com/open-source-file-downloads SCR_021439 Catalepsy Bar 2026-09-12 12:59:55 0
Skinner Box project
 
Resource Report
Resource Website
Skinner Box project (RRID:SCR_021437) data or information resource, instrument resource, portal, project portal Project related to training animal behavior. Provides system which includes full behavioral apparatus and software platform. System includes software tool for data logging and analysis. Open Skinner Box, data logging, data analysis, behavioral system, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: Skinner Box
Free, Freely available SCR_021437 Skinner Box 2026-09-12 12:59:55 0
optoPAD project
 
Resource Report
Resource Website
1+ mentions
optoPAD project (RRID:SCR_021453) data or information resource, instrument resource, portal, project portal Project related to analysis of behavior and of neural activity. Provides system which allows for specific perturbation of specific groups of neurons. Used as method to induce appetitive and aversive effects on feeding through activating or inhibiting gustatory neurons in closed loop manner. Bonsai workflow, data acquisition, visual programming language, Bonsai, OpenBehavior, Instrument DOI:10.1038/ncomms5560 Free, Freely available SCR_021453 optoPAD 2026-09-12 12:59:56 1
flyPAD project
 
Resource Report
Resource Website
flyPAD project (RRID:SCR_021449) data or information resource, instrument resource, portal, project portal Project related to analysis of behavior and of neural activity. Provides FPGA code for running main board of flyPAD. FPGA code, running main board of flyPAD, VHDL, Quartus 2, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: flyPAD
DOI:10.1038/ncomms5560 Free, Freely available SCR_021449 flyPAD 2026-09-12 12:59:55 0
Low Cost Open Source Eye Tracking project
 
Resource Report
Resource Website
Low Cost Open Source Eye Tracking project (RRID:SCR_021415) data or information resource, instrument resource, portal, project portal Project related to eye tracking system for human research.System includes open source software for accurate eye tracking. Can identify shapes such as circles, lines, and triangles.You can rotate and mirror images and also use variety of filters.Capable of processing video in real-time for optical flow. App for viewing multiple video streams from USB cameras. Real time eye tracking, identify shapes, identify circles, identify lines, identify triangles, fixed point laser beacons, camera, processing video in real time, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: Low Cost Open Source Eye Tracking
Free, Freely available SCR_021415 Low Cost Open Source Eye Tracking 2026-09-12 12:59:55 0
Locomouse project
 
Resource Report
Resource Website
Locomouse project (RRID:SCR_021390) data or information resource, instrument resource, portal, project portal Project related to study movement coordination in free walking mice. Provides noninvasive system consisting of cameras and machine learning algorithms that allow for three dimensional detection and tracking of mouse paws, tail, and nose. Movement study, movementcoordination, free walking mice, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: LocoMouse
DOI:10.7554/elife.07892 Free, Freely available SCR_021390 Locomouse 2026-09-12 12:59:55 0
DeepPoseKit project
 
Resource Report
Resource Website
DeepPoseKit project (RRID:SCR_021395) data or information resource, instrument resource, portal, project portal Project related to pose estimation and tracking.Includes software toolkit for 2D pose estimation of user defined keypoints using deep learning.Method for pose estimation developed by behavioral scientists at the Max Planck Institute of Animal Behavior. 2D pose estimation, animal pose estimation, animal behavior, DeepLabCut, Leap, Max Planck Institute, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: DeepPoseKit
DOI:10.7554/elife.47994 Free, Freely available SCR_021395 DeepPoseKit 2026-09-12 12:59:55 0
EthoScopes project
 
Resource Report
Resource Website
EthoScopes project (RRID:SCR_021426) data or information resource, instrument resource, portal, project portal Project related to analysis of behavior in Drosophila.Provides system capable of real time video tracking. System includes raspberry pi and R package for data analysis. Enables high throughput analysis of behavior in Drosophila and other animals. Data analysis, ethoscope platform, behavior analysis, Drosophila analysis, animals behavior analysis, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: EthoScopes
DOI:10.1371/journal.pbio.2003026 Free, Freely available SCR_021426 EthoScopes 2026-09-12 12:59:55 0
Picamera project
 
Resource Report
Resource Website
Picamera project (RRID:SCR_021423) data or information resource, instrument resource, portal, project portal Project related to tracking animals in large spaces. Picamera system allows for tracking of animals in large behavioral arenas.Open source scalable multi camera tracking system that can be used to track behavior in combination with wireless recording systems.Design is comprised of 8 overhead Raspberry Pi cameras, capable of recording at high frame rate in large field of view, recording video independently in individual Raspberry Pi microcomputers and processed using Picamera Python library. Tracking rats in large spaces, camera system, Picamera Python library, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1152/jn.00215.2018 Free, Freely available SCR_021423 Picamera 2026-09-12 12:59:55 0
Live Mouse Tracker project
 
Resource Report
Resource Website
Live Mouse Tracker project (RRID:SCR_021421) LMT data or information resource, instrument resource, portal, project portal Project related to monitoring social interactions of mice. Provides real time behavioral analysis system for groups of mice.System includes random forest machine learning process, RFID sensors and infrared depth RGB-D camera.System includes software tool for Live Mouse Tracker analysis. Behavioral analysis system, groups of mice, assess complex social behavioral, differences between mice, , lmt-analysis, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: Live Mouse Tracker analysis
is related to: Live Mouse Tracker Toolkit Analysis
DOI:s41551-019-0396-1 Free, Freely available SCR_021421 Live Mouse Tracker 2026-09-12 12:59:55 0
D-Track project
 
Resource Report
Resource Website
D-Track project (RRID:SCR_021389) data or information resource, instrument resource, portal, project portal Project related to tracking animal behavior. Provided system includes two cameras and software package to track aquatic animals within captivity.Semi automatic 3D video tracking technique to analyse movements and routines of aquatic animals with application to captive dolphins. Object tracking, track aquatic animals, dolphin tracker, 3D video tracking, analyse movements, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: D-Track
DOI:10.1371/journal.pone.0201614 Free, Freely available SCR_021389 D-Track 2026-09-12 12:59:55 0
Zeiss: Electron Microscope 900
 
Resource Report
Resource Website
1+ mentions
Zeiss: Electron Microscope 900 (RRID:SCR_021364) instrument resource Research Transmission Electron Microscope with accelerating voltage of 80kV used to image low contrast biological samples. TEM, Zeiss, microscope, electron microscope, accelerating voltage of 80kV, image low contrast biological samples, instrument, equipment, USEDit is listed by: USEDit Model_Number_EM900 SCR_021364 ZEISS EM900, ZEISS 900 2026-09-12 12:59:54 1
OpenVape project
 
Resource Report
Resource Website
1+ mentions
OpenVape project (RRID:SCR_021485) data or information resource, instrument resource, portal, project portal Project related to conducting research on effects of nicotine vapor. Provides open source chamber system for rodents to experience regulated nicotine vapor exposure from JUUL electronic cigarette.Vapor exposure apparatus comprised of Arduino Uno microcontroller that relays coded instructions to H-bridge motor controller.H-bridge then sends specific signals to motors that regulate produced vapor sent to exposure chambers. Regulated nicotine vapor exposure, JUUL electronic cigarette, vapor exposure apparatus, Arduino Uno microcontroller, H-bridge motor controller, exposure chamber, rodent nicotine exposure, OpenBehavior, Instrument is listed by: OpenBehavior
has parent organization: University of Guelph; Ontario; Canada
DOI:10.1523/eneuro.0279-20.2020 Free, Available for download, Freely available https://www.khokharlab.com/open-source-file-downloads SCR_021485 OpenVape 2026-09-12 12:59:56 1
Tecnai G2 20 Electron Microscope
 
Resource Report
Resource Website
1+ mentions
Tecnai G2 20 Electron Microscope (RRID:SCR_021365) instrument resource Research transmission electron microscope with accelerating voltage of 80-200kV. Transmission Electron Microscope from FEI (now Thermo Fisher Scientific) is equipped with LaB6 cathode. Enables both bright field EM and scanning transmission electron microscopy (STEM) at very high resolution (at 200kV: point resolution up to 0.27 nm). FEI, TEM, Tecnai, electron microscope, microscope, Transmission Electron Microscope, accelerating voltage of 80-200kV, instrument, equipment, USEDit is listed by: USEDit https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_021365.pdf Model_Number_Tecnai_G2_20 http://www.lab.umcs.lublin.pl/TecnaiG2.pdf SCR_021365 FEI Tecnai G2 20 Electron Microscope, Tecnai G2 20, TEM Tecnai G2 20 2026-09-12 12:59:54 4
An open source motorized swivel for in vivo neural and behavioral recordings project
 
Resource Report
Resource Website
An open source motorized swivel for in vivo neural and behavioral recordings project (RRID:SCR_021482) data or information resource, instrument resource, portal, project portal Project related to neural recordings such as electrophysiology, calcium imaging, and optogenetics. Provides 3D-printed, motorized commutator for neural recordings of small animals in vivo.Open source motorized swivel for in vivo neural and behavioral recordings.Device operates independently of data acquisition system, and it can be controlled through any popular platform such as Arduino or Raspberry Pi. Motorized commutator, neural recordings, small animals in vivo recording, motorized swivel, behavioral recordings, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1016/j.mex.2020.101167 Free, Freely available SCR_021482 An open source motorized swivel for in vivo neural and behavioral recordings 2026-09-12 12:59:56 0
Precision Syringe Pump Controller project
 
Resource Report
Resource Website
Precision Syringe Pump Controller project (RRID:SCR_021493) data or information resource, instrument resource, portal, project portal Project related to dispensing precise volumes of fluid over precise timescales.System components include syringe holder and control board with syringe pump controller and programming library.Syringe pump controller was developed by American University scientists. Syringe pump controller, dispensing precise fluid volumes, fluid over precise timescales, syringe holder, control board with syringe pump controller and programming library, OpenBehavior, Instrument is listed by: OpenBehavior
has parent organization: American University; Washington D.C.; USA
DOI:10.1523/eneuro.0240-19.2019 Free, Freely available SCR_021493 Precision Syringe Pump Controller 2026-09-12 12:59:56 0
Pi Virtual Reality System project
 
Resource Report
Resource Website
Pi Virtual Reality System project (RRID:SCR_021490) PiVR data or information resource, instrument resource, portal, project portal Project related to study of orientation behavior and neural circuit functions, through creation and analysis of small, freely moving animals in virtual realities. Provides virtual reality tool system for behavioral and neural circuit studies of small animals.Closed loop platform to study unrestrained sensorimotor behavior. Virtual reality, behavioral and neural circuit, small animal, closed loop platform, unrestrained sensorimotor behavior, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1371/journal.pbio.3000712 Free, Freely available SCR_021490 Pi Virtual Reality System 2026-09-12 12:59:56 0

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