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https://www.biodiscovery.com/products/nexus-copy-number?hsLang=en

Software package provides statistical tools. Derives copy number and BAF from variety of NGS data including WES, WGS, targeted panel, and shallow sequencing as well as Microarray data. Multifaceted desktop software for rapid discovery of genomic alterations. Accepts data from various manufacturers and technologies including Infinium GSA and CytoScan XON.

Proper citation: BioDiscovery Nexus Copy Number (RRID:SCR_004557) Copy   

•   Source: SciCrunch Registry
  

http://www.brt.org.uk/

Brain Research Trust is a Registered Charity (no. 1137560) and a Company Limited by Guarantee (no. 7345516) promoting and supporting vital research. With the help of our donors, Brain Research Trust supports world-class research at University College London''''s Institute of Neurology (IoN), London. We were able to provide a record 2.3m pounds to research grants in the 09/10 financial year and has been supporting its vital research program for almost 40 years. Brain Research Trust comprises a dedicated fundraising team, a supportive Board of Trustees and a knowledgeable Scientific Advisory Panel who all work together closely to ensure your money goes towards the best neurological research projects. Some of the conditions into which we fund research include: Alzheimer''''s Disease, Ataxia, Brain Tumours, Creutzfeldt-Jakob Disease, Dystonia, Epilepsy, Huntington''''s Disease, Migraine, Motor Neurone Disease, Multiple Sclerosis, Parkinson''''s Disease, Progressive Supranuclear Palsy, Stroke. The Institute of Neurology also carries out research into Autism, Aphasia, Guillain-Barre Syndrome, M��ni��re''''s Disease, Multiple Systems Atrophy (MSA), Myasthenia Gravis, Niemann-Pick Disease, Shy-Drager Syndrome, Tay-Sachs Disease and Tourette Syndrome.

Proper citation: Brain Research Trust (RRID:SCR_004678) Copy   

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http://tu-dresden.de

Public research university founded in 1828. One of the largest Universities of Technology in Germany.

Proper citation: Dresden University of Technology; Saxony; Germany (RRID:SCR_004799) Copy   

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http://www.usidnet.org/

Research consortium to advance scientific research in the primary immune deficiency diseases (PIDD) and: * Assemble and maintain a registry of patients with primary immunodeficiency diseases to provide a minimum estimate of the prevalence of each disorder in the United States. Provide a comprehensive clinical picture of each disorder and act as a resource for clinical and laboratory research. * Establish a multifaceted mentoring program to introduce new investigators into the field and stimulate interest and research in primary immune deficiency diseases. * Establish an advisory/review committee to maintain a cell/DNA Repository of biologic material from well-characterized PIDD patients for the advancement of scientific research USIDNET operates a large database of patient information for your use. The purpose and scope of this project is to assemble and maintain a registry of residents with primary immunodeficiency diseases. The project was started with the Registry of U.S. Residents with Chronic Granulomatous Disease. Since then, the registry has been expanded and now collects data on all primary immunodeficiency disorders. The following are just a few of the diseases housed in the registry: Chronic Granulomatous Disease, Common Variable Immunodeficiency Disease, DiGeorge Anomaly, Hyper IgM Syndrome, Leukocyte Adhesion Defect, Severe Combined Immunodeficiency Disease, Wiskott-Aldrich Syndrome, X-Linked Agammaglobulinemia Physicians who would like to register their patients or access the registry are encouraged to contact Onika Davis or Lamar Hamilton, USIDNET team, at odavis (at) primaryimmune.org, or lhamilton (at) primaryimmune.org

Proper citation: USIDNET: US Immunodeficiency Network (RRID:SCR_004672) Copy   

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http://en.wikibooks.org/wiki/Surgical_Procedures

Surgical Procedures is a wikibook on surgical procedures. It is by no means intended to be a guide to at-home surgery. Surgical illness should only be managed by a professional medical expert (e.g Surgeon). Topics include: 1. Abdominoplasty 2. Adenoidectomy 3. Amputation 4. Melanoma 5. Mandibular Fractures 6. General Surgery Guidelines 7. Abdominal Surgery A. Cholecystectomy * Open Cholecystectomy * Lap Cholecystectomy B. Cholecystitis C. Cholecystography D. Cholelithiasis E. Choledocholithiasis 8. General Surgery 9. Acid Base Disorder 10. Plastic Surgery

Proper citation: Surgical Procedures (RRID:SCR_004793) Copy   

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http://science-society.com/conference-2012/

Welcome to the website of the Fourth International Conference on Science in Society, to be held at the University of California, Berkeley, USA from 17 to 19 November 2012. This Conference will address disciplinary and interdisciplinary challenges in the sciences, and in particular the relationships of science to society. Key themes addressed by the Conference include the social impacts of science, the values and ethics of science, the pedagogies of science, the knowledge-making processes of science, the politics of science and the economics of science. At first glance, the scope and concerns of the Conference are enormous. However, in contrast to conferences with a specialist disciplinary focus, this Conference aims to explore, in an interdisciplinary spirit, linkages between different areas of concern and practices of investigation. We welcome presentation proposals which range from broad explorations of philosophical, theoretical, methodological and policy questions, to proposals which present finely grained evidence of the connections of science to society in microcosms of research, teaching and practice. Participants at the Conference will include researchers, teachers, administrators and policy makers from the basic natural-physical sciences, the applied sciences, the social sciences, history and philosophy of science, the humanities, and the professions. Plenary speakers will include some of the world's leading thinkers in the various fields which are concerned with the relationships of science to society, as well as numerous paper, colloquium and workshop presentations by practitioners, teachers and researchers. Participants are welcome to submit a presentation proposal either for a 30-minute paper, 60-minute workshop, or a jointly presented 90-minute colloquium session. Parallel sessions are loosely grouped into streams reflecting different perspectives or disciplines. Each stream also has its own talking circle, a forum for focused discussion of issues. For those unable to attend the Conference in person, virtual participation is also available. We encourage all presenters to submit written papers to The International Journal of Science in Society, a fully refereed academic Journal. Virtual participants may also may also submit papers for consideration by the Journal. All Conference participants who have finalized their registration will receive a complimentary online subscription to the Journal. This subscription is valid until one year after the Conference end date. If you would like to know more about this Conference, bookmark the Science in Society site and return for further information-the site is regularly updated. You may also wish to subscribe to the Conference and Journal Newsletter.

Proper citation: Science in Society Conference (RRID:SCR_004553) Copy   

•   Source: SciCrunch Registry
  

http://primaryimmune.org/

National non-profit patient organization dedicated to improving the diagnosis, treatment and quality of life of persons with primary immunodeficiency diseases through advocacy, education and research. One of the greatest challenges faced by individuals diagnosed with primary immunodeficiency disease is finding the right information and resources when they need it. With knowledge and foresight from their personal experience, the Immune Deficiency Foundation (IDF) was founded by families of children with primary immunodeficiency diseases and their physicians to help meet those needs. It is with the spirit and energy of this keen perspective that IDF exists today, thriving as an organization dedicated to individuals living with primary immunodeficiencies. Since 1980, IDF has provided accurate and timely information for the nearly quarter-million Americans who have been diagnosed with a primary immunodeficiency disease. Governed by a Board of Trustees and supported by a Medical Advisory Committee comprised of some of the world''s leading clinical immunologists, as well as hundreds of grassroots volunteers and a compassionate, professional staff IDF has provided individuals and their families with vital knowledge and made tremendous strides in: * Helping the patient and medical community gain a broader understanding of primary immunodeficiency diseases through education and outreach efforts; * Promoting, participating, and funding research that has helped characterize primary immunodeficiency diseases and given patients and physicians substantially improved treatment options; * Addressing patient needs through public policy programs by focusing on issues such as insurance reimbursement, patient confidentiality, ensuring the safety and availability of immune globulin therapy, and maintaining and enhancing patient access to treatment options. Today, thousands of individuals and families affected by primary immunodeficiency diseases depend on IDF for advocacy, education and empowerment.

Proper citation: Immune Deficiency Foundation (RRID:SCR_004674) Copy   

•   Source: SciCrunch Registry
  

http://www.ucdenver.edu/academics/colleges/medicalschool/Pages/somWelcome.aspx

One of the medical schools in the U.S., consistently ranked among the top in the nation.

Proper citation: University of Colorado School of Medicine; Colorado; USA (RRID:SCR_004670) Copy   

•   Source: SciCrunch Registry
  

https://www.boehringer-ingelheim.com/

An Antibody supplier

Proper citation: Boehringer (RRID:SCR_004791) Copy   

•   Source: SciCrunch Registry
  

http://www.samhealth.org/Pages/default.aspx

Samaritan Health Services (SHA) is a non-profit network of hospitals, physician clinics and health services caring for the communities of the mid-Willamette Valley and central Oregon Coast. We''ve joined together to provide innovative medicine and world-class quality in a way that''s consistent with the values of the places we serve. That includes care and compassion for everyone, regardless of the ability to pay. Samaritan Health Services is a values-driven, church-related organization governed by community members, physicians and other health care providers. We seek to be the first choice of consumers in the region and to lead collaborative efforts among those who share similar goals.

Proper citation: Samaritan Health Services (RRID:SCR_004548) Copy   

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http://bioinfo.au.tsinghua.edu.cn/subMito/

SubMito is the first computational system for predicting protein submitochondria locations from its primary sequence. SubMito is designed and implemented with Java. This site is a web-like front end for SubMito system. Users can access SubMito on the server side by uploading a FASTA file or entering sequence below. The prediction result will be saved on server, and a link to the result file will be provided. Since there may be several sessions running at the same time on the server, the responding of the server side SubMito may be very slow. Another way to use SubMito is to download a local version of the software. The online service can accept 2 forms of input. One is single sequence, the other is uploaded FASTA file. If you want to predict submitochondria location for a single sequence, you can paste your sequence in the text box. Optionally, you can choose to write some remarks in the text field labeling Enter your remark. Then, press the Submit button to perform the prediction. The result will be saved in a FASTA format file, and you can download it at any time in the coming 48 hours.

Proper citation: SubMito (RRID:SCR_004572) Copy   

•   Source: SciCrunch Registry
  

http://dcoe.health.mil/

The Defense Centers of Excellence for Psychological Health and Traumatic Brain Injury (DCoE) was established in November 2007 to integrate knowledge and identify, evaluate and disseminate evidence based practices and standards for the treatment of psychological health and TBI within the Defense Department. DCoE is part of the Military Health System, which provides a ''continuum of care'' from initial accession to deployment to discharge. DCoE works across the entire continuum of care to promote resilience, rehabilitation and reintegration for warriors, families and veterans with psychological health concerns and traumatic brain injuries. DCoE leads a groundbreaking collaborative effort that includes the Department of Veterans Affairs (VA), civilian agencies, community leaders, advocacy groups, clinical experts and academic institutions that are dedicated to expanding the state of knowledge of psychological health and TBI. In addition, DCoE''s Real Warriors Campaign is working to encourage help-seeking behavior for warriors with post-traumatic stress or mTBI. DCoE brings together six directorates and three centers. Their joint goal is to maximize opportunities for warriors and families to thrive through a collaborative global network to promote resilience, recovery and reintegration for PH and TBI.

Proper citation: Defense Centers of Excellence for Psychological Health and Traumatic Brain Injury (RRID:SCR_004696) Copy   

•   Source: SciCrunch Registry
  

http://huttenhower.sph.harvard.edu/metaphlan2

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data. It relies on unique clade-specific marker genes identified from reference genomes.

Proper citation: MetaPhlAn (RRID:SCR_004915) Copy   

•   Source: SciCrunch Registry
  

http://scicrunch.org

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 26, 2019.An international Non-Profit Organization that advocates Open Access for never-before-published research papers on the web and provides Self-Archiving platform to enable better knowledge sharing in a way that''s easy to publish. They collect scientific material (not only publications), e.g., Journal Articles, Theses or Dissertations, Departmental Bulletin Papers, Conference Papers, Presentations, Books, Technical Reports, Research Papers, Articles, Preprints, Learning Materials, Others. If you have such a paper and would like to add a Creative Commons license to your work, or if your working organization has no Institutional Repository (IR), Open your archives to spread them to the world. How to use: 1. Sign in with Twitter 2. Select PDF and add a Creative Commons license 3. Publish and Share on Social Media Video tutorial: http://myopenarchive.org/whatsmyoa

Proper citation: MyOpenArchive (RRID:SCR_004917) Copy   

•   Source: SciCrunch Registry
  

http://u-compare.org/

An integrated text mining / natural language processing system based on the Unstructured Information Management Architecture (UIMA) Framework. It allows interoperability of text mining tools and allows the creation of text mining workflows, comparison and visualization of tools. U-Compare can be launched straight from the web or downloaded. As the name implies comparison of components and workflows is a central feature of the system. U-Compare allows sets of components to be run in parallel on the same inputs and then automatically generates statistics for all possible combinations of these components. Once a workflow has been created in U-Compare it can be exported and shared with other users or used with other UIMA compatible tools and so in addition to comparison, U-Compare also functions as a general purpose workflow creation tool. It contains a repository of 50+ biomedical text mining components. These components are included in the U-Compare single-click-to-launch package, ready to use by just drag-and-drop. You can also use this repository independent from the U-Compare system. Link with Taverna It has a link with Taverna for scientific workflows, http://bioinformatics.oxfordjournals.org/content/26/19/2486.abstract, where you can use U-Compare and its workflow from within the Taverna workflow. There are two ways, the U-Compare Taverna plugin and the U-Compare command line mode as a Taverna activity. We have recently integrated it with Peter Murray-Rust''''s OSCAR for Chemistry (see http://www.nactem.ac.uk/cheta/) Web Demo: http://www.nactem.ac.uk/software/cheta/

Proper citation: U-Compare (RRID:SCR_004911) Copy   

•   Source: SciCrunch Registry
  

http://i.cs.hku.hk/~alse/MetaCluster/

A software for binning and annotating short paired-end reads.

Proper citation: MetaCluster-TA (RRID:SCR_004599) Copy   

•   Source: SciCrunch Registry
  

http://eyewiki.aao.org/Main_Page

EyeWiki is an ophthalmic wiki where ophthalmologists, other physicians, patients and the public can view an eye encyclopedia of content written by ophthalmologists covering the vast spectrum of eye disease, diagnosis and treatment. Any qualified ophthalmologist, or ophthalmologist in training, is invited to contribute content to the wiki and post it immediately. Categories: *Cataract / Anterior Segment *Cornea / External Disease *Glaucoma *Miscellaneous *Neuro-ophthalmology / Orbit *Oculoplastics / Orbit *Oncology / Pathology *Pediatric Ophthalmology / Strabismus *Refractive Management / Intervention *Retina / Vitreous *Uveitis

Proper citation: EyeWiki (RRID:SCR_004595) Copy   

•   Source: SciCrunch Registry
  

http://www.ndriresource.org/NDRI_Initiatives/HBDI/36/

Database of medical history and genealogical data on over 6700 families who are affected by type 1 diabetes and a repository of DNA and immortalized cell lines collected from 500 families. This database and repository was originally created to help researchers uncover the genetic causes of type 1 diabetes but today, it is also used by researchers who study type 2 diabetes, diabetic complications, autoimmune diseases, kidney disease, and other disorders. The following resources and services are available to researchers through HBDI: * International Type 1 Diabetes Database: This database includes more than 6700 families with diabetes, related complications and other genetic diseases. There are extensive genealogical and medical histories for more than 90,000 individuals. NDRI conducts searches of the database for approved research requests. * HBDI Catalog: The catalog contains 503 family pedigrees with associated cell lines, DNA, and serum for research. Also available are HLA-typing and auto-antibody test results for diabetes families in the catalog. * HBDI Repository: The HBDI repository contains cell lines, DNA, and HLA typing information from 480 families, and frozen buffy coats from 23 families, all with Type 1 diabetes. They have recently expanded the repository to include specimens from individuals with rare diseases. * Customized Collections: NDRI will collect data from patients and physicians, conduct phone interviews and collect blood and other specimens for research on request., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: Human Biological Data Interchange (RRID:SCR_004591) Copy   

•   Source: SciCrunch Registry
  

http://www2.le.ac.uk/

Public research university based in Leicester, England. Famous for the discovery of genetic fingerprinting and contributing to the discovery and identification of the remains of King Richard III.

Proper citation: University of Leicester; Leicester; United Kingdom (RRID:SCR_004900) Copy   

•   Source: SciCrunch Registry
  

http://www.mercer.edu/

Private research university with its main campus in Macon, Georgia. Founded in 1833 as Mercer Institute and gaining university status in 1837.

Proper citation: Mercer University; Georgia; USA (RRID:SCR_004819) Copy   

•   Source: SciCrunch Registry