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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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http://mbcf.dfci.harvard.edu

Core offers services for genomic next-generation sequencing library preparation, sequencing and analysis applications including RNAseq, ChIPseq, ATACseq, CRISPR screening, whole genome methylation profiling, targeted resequencing, single-cell RNAseq, exome sequencing, and more. Performs bioinformatics analysis such as integration of multi-omics datasets or specialized analyses. Genomics core technology platforms include Illumina NovaSeq6000, NextSeq500s, MiSeqs, MiniSeq. High throughput sample preparation is performed on Beckman Coulter Biomek FX and i7 systems. Low throughput samples are prepared by technical staff.

Proper citation: Dana-Farber Cancer Institute Molecular Biology Core Facility (RRID:SCR_009754) Copy   


https://sites.dartmouth.edu/toxmetal/program-resources/trace-element-analysis/

Analysis of elemental composition of biological tissues and fluids by Inductively Coupled Plasma Mass spectrometry. Analysis of Arsenic species in urine and blood by chromatography-ICP-MS. Laser ablation analysis of tissue sections for imaging of elemental distributions.

Proper citation: Dartmouth Trace Element Analysis Core Facility (RRID:SCR_009777) Copy   


https://www.lsuhs.edu/centers/center-for-post-transcriptional-regulation/research-cores

Metabolomics and Machine Learning Core provides metabolite profiling and stable-isotope tracing, molecular modeling, and machine learning to integrate datasets across transcriptomic, proteomic, and metabolomic analysis.

Proper citation: Louisiana State University Health Sciences Center Shreveport Metabolomics and Machine Learning Core Facility (RRID:SCR_027717) Copy   


https://icahn.mssm.edu/research/resources/deans-cores/flow-cytometry

Situated within the Icahn School of Medicine at Mount Sinai, our CoRE provides all members of the Mount Sinai Health System community with the instrumentation, expertise, and education required to incorporate flow cytometry and cell sorting into any research project.

Proper citation: Icahn School of Medicine at Mount Sinai Flow Cytometry CoRE Core Facility (RRID:SCR_027701) Copy   


https://www.mskcc.org/research/ski/core-facilities/bioinformatics

Core provides bioinformatics support services including creating and maintaining repository of bioinformatics pipelines, providing customized data analysis support, assisting computational researchers in their research efforts, and training staff in computational and bioinformatics techniques. Provides bioinformatics software applications and pipelines for experimental assays ranging from standard genomics pipelines like RNAseq and variant detection to the growing demand for single-cell processing workflows and new spatial-based assays in transcriptomics and proteomics. Provides training and consulatation.

Proper citation: Memorial Sloan Kettering Cancer Center Bioinformatics Core Facility (RRID:SCR_027794) Copy   


https://www.utsouthwestern.edu/research/core-facilities/histo-pathology/

Core offers research histology and anatomic pathology services and customized pathology services. Facilitates morphologic and histologic assessment of murine transgenic and knockout phenotypes as well as experimental procedure-based models of disease for basic and clinical research. We utilize expertise in gross pathology, routine histology, immunohistochemistry, tissue microarray, spatial transcriptomics, spatial proteomics, laser-capture microdissection, materials science, photomicrography, and image analysis.

Proper citation: University of Texas Southwestern Medical Center Dallas Histo Pathology Core Facility (RRID:SCR_027706) Copy   


https://viceprovost.tufts.edu/flow-cytometry-core

Core offers Flow and Laser Cytometry equipment and services including FACS Analysis and Cell Sorting, to the scientific community.

Proper citation: Tufts University Laser Cytometry Core Facility (RRID:SCR_027709) Copy   


http://tucf-genomics.tufts.edu/

Core provides protein sequencing services including Next-Generation DNA Sequencing, Peptide Synthesis, Protein Sequencing, and Mass Spectrometry. Provides expert technical and analytical support.

Proper citation: Tufts University Genomics Core Facility (RRID:SCR_027708) Copy   


https://research.bidmc.org/redcap-core

REDCap (Research Electronic Data Capture) is a secure HIPAA compliant web-based data collection application hosted by Research and Academic Computing (ARC), a department of Beth Israel Deaconess Medical Center (BIDMC) which is itself part of Beth Israel Lahey Health (BILH). The function of the REDCap Core is to provide REDCap-related services and support to all BILH users.

Proper citation: Beth Israel Deaconess Medical Center BILH/BIDMC REDCap Core Facility (RRID:SCR_027761) Copy   


https://microscopie.ibis.ulaval.ca/

IBIS Microscopy platform offers sample preparation and acces to TEM, SEM, STED, confocals and other microscopes.

Proper citation: Laval University IBIS Imaging and Microscopy Platform Core Facility (RRID:SCR_027763) Copy   


https://www.digitalpsych.org/mindlamp1.html

Core collects data to capture and consider the real-time lived experiences of patients. Uses open-source digital platform and mobile app for neuropsychiatric research and clinical care, to monitor, support, and improve brain health by collecting real-time data (like location, activity, heart rate via sensors), conducting digital assessments (surveys, cognitive tests), and delivering interventions (meditation, journaling, psychoeducation) to patients and clinicians. It helps study behavioral patterns, track symptoms, and personalize mental health treatment through features organized around Learn, Assess, Manage, and Prevent.

Proper citation: BIDMC Division of Digital Psychiatry LAMP platform Core Facility (RRID:SCR_027767) Copy   


https://www.bidmc.org/research/research-and-academic-affairs/clinical-research-at-bidmc/clinical-research-center

Offers investigators clinical space, equipment, skilled nursing and nutrition services, project management and study coordinator support, resources for conducting community engagement research, as well as one-on-one consultation with Clinical/Translational Research Navigators.

Proper citation: BIDMC Clinical Research Center Clinical Services Core Facility (RRID:SCR_027766) Copy   


https://imaging.uci.edu/fibre/

Facility for Imaging and Brain Research houses 3T Siemens Prisma scanner, mock scanner, and data analysis facilities. Research dedicated MRI scanning facility designed to suit wide range of basic and translational research programs by researchers across the UCI campus and beyond.

Proper citation: University of California at Irvine FIBRE Core Facility (RRID:SCR_027777) Copy   


https://ccg.uni-koeln.de/

Represents central facility and does not operate for profit, engaging in academic research collaborations and service provision on collaborative basis. Provides infrastructure for all kinds of sequencing, gene mapping and whole genome association studies in complex diseases as well as the validation of copy number variations.

Proper citation: University of Cologne Center for Genomics (CCG) Core Facility (RRID:SCR_027822) Copy   


https://www.mskcc.org/research/ski/core-facilities/biostatistics

Core provides expertise on study design and statistical analysis. Devoted to developing and understanding ways to derive scientific inferences from quantitative data and to developing methods for achieving this aim. The staff are highly trained in this field and experienced in all of the specialized areas of statistical techniques including clinical trials methodology, survival analysis, epidemiologic methods, analysis of genomics data, statistical genetics, methods for diagnostic medicine, health services research, survivorship, evidence-based medicine and psychometric methods.

Proper citation: Memorial Sloan Kettering Cancer Center Biostatistics Core Facility (RRID:SCR_027821) Copy   


https://www.mskcc.org/research/ski/core-facilities/pathology

Biobank and Pathology Core provides resources for human biospecimen-based research to be used to study causes, detection, prevention, and treatment of cancer.Central facility for the collection, processing, storage, and distribution of fresh, frozen, and FFPE-processed human biospecimens (tissues, blood, bone marrow, urine, and other liquid samples) for research use. Core also serves as national resource, as evidenced by the several hundred samples from multiple tumor types that have been provided to the Cancer Genome Atlas (TCGA) and NCI’s CPTAC proteogenomic consortium. Histology Service within the Core facilitates selection of appropriate specimens for tissue analyses and provides the basic services of cutting, dissecting, and staining of fresh-frozen and formalin-fixed, paraffin-embedded tissues. It includes construction of tissue microarray blocks and laser capture microdissection for isolation of pure cell populations and tumor cell enrichment. The Core’s Immunohistochemistry Service provides immunostaining using optimized antibodies for clinico-pathologic research studies.

Proper citation: Memorial Sloan Kettering Cancer Center Biobank and Pathology Core Facility (RRID:SCR_027796) Copy   


https://www.mskcc.org/research/ski/core-facilities/comparative-medicine-pathology-0

Core supports animal model use in cancer research through teams including Research Animal Resource Center (RARC) and Laboratory of Comparative Pathology (LCP). Animals are employed in the development of new methods for diagnosis and treatment of cancer as well as the elucidation of the basic biological mechanisms resulting in neoplasia. CCMP’s professional and paraprofessional staff (152 FTE) serve as a consultative and technical resource for MSK investigators on all matters related to animal research.

Proper citation: Memorial Sloan Kettering Cancer Center- Center of Comparative Medicine and Pathology Core Facility (RRID:SCR_027798) Copy   


https://www.mskcc.org/research/ski/core-facilities/biotherapeutics

Core provides collaborative process development support to investigators across the Center engaged in new Biotherapeutics initiatives. Core staff are responsible for converting research-lab processes into GMP-compliant manufacturing processes. This includes establishing Standard Operating Procedures (SOPs) and batch records for cell processing, cell engineering, and vector production. Provides full support for cGMP manufacturing of cell products: handling patient cells in cGMP environment, from purification and transduction to expansion and formulation, for use in phase 1 and phase 2 clinical trials. Manufactures vector stocks, oversees biosafety and releases testing of generated projects for human use. This includes analysis of patient cells and vector stocks, assessing characteristics such as phenotype, potency, purity, and stability. Gene transfer and expression analyses are also performed. Core performs analytical post-infusion monitoring. For each trial, the Core develops a comprehensive set of analytical tests to ensure quality and safety of the manufactured drug products.

Proper citation: Memorial Sloan Kettering Cancer Center Biotherapeutics Core Facility (RRID:SCR_027797) Copy   


https://hpc.lums.edu.pk/

LUMS High-Performance Computing (HPC) facility is specialized computational research core providing high-density processing power and large-scale data storage. It serves as a central hub for faculty and students to execute data-intensive simulations, machine learning workflows, and complex modeling across various scientific disciplines.

Proper citation: Lahore University of Management Sciences Syed Babar Ali School of Science and Engineering High Performance Computing Core Facility (RRID:SCR_027827) Copy   


https://mass-spec.wp.st-andrews.ac.uk/

Core provides services in mass spectrometry including protein identification and analysis, measuring the intact mass of proteins and quantitative proteomics.

Proper citation: University of St Andrews Mass Spectrometry and Proteomics Core Facility (RRID:SCR_027881) Copy   



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