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http://purl.bioontology.org/ontology/MIRO

Application ontology for entities related to insecticide resistance in mosquitos

Proper citation: Mosquito Insecticide Resistance Ontology (RRID:SCR_003864) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/EMAP

A structured controlled vocabulary of stage-specific anatomical structures of the mouse (Mus).

Proper citation: Mouse Gross Anatomy and Development Ontology (RRID:SCR_003891) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/MSTDE-FRE

Metathesaurus Version of Minimal Standard Terminology Digestive Endoscopy, French Translation, 2001

Proper citation: Minimal Standard Terminology of Digestive Endoscopy - French (RRID:SCR_003830) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/SNOMEDCT

Ontology of SNOMED (Systematized Nomenclature of Medicine) clinical terms.

Proper citation: Systematized Nomenclature of Medicine - Clinical Terms (RRID:SCR_003915) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/MPATH

A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes

Proper citation: Mouse Pathology Ontology (RRID:SCR_003950) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/NHSQI2009

Ontology to organise a 2009 set of over 200 NHS quality indicators from different sources. Relationships between indicators, a basic set of inclusion / exclusion criteria, clinical pathway, clinical code and purpose (per 1992 Institute of Medicine, originally intended to categorise clinical guidelines) are identifies and made searchable.

Proper citation: NHS Quality Indicators (RRID:SCR_004005) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/OPB

A reference ontology of classical physics as applied to the dynamics of biological systems. It is designed to encompass the multiple structural scales (multiscale atoms to organisms) and multiple physical domains (multidomain fluid dynamics, chemical kinetics, particle diffusion, etc.) that are encountered in the study and analysis of biological organisms.

Proper citation: Ontology of Physics for Biology (RRID:SCR_004144) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/BOF

An ontology of biodiversity of INPA

Proper citation: Biodiversity Ontology (RRID:SCR_010204) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/GEXO

An application ontology for the domain of gene expression. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, KEGG and orthology relations.

Proper citation: Gene Expression Ontology (RRID:SCR_010326) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/GFO

A top-level ontology integrating objects and processes.

Proper citation: General Formal Ontology (RRID:SCR_010328) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/GFO-BIO

A biological core ontology built on the General Formal Ontology.

Proper citation: General Formal Ontology for Biology (RRID:SCR_010329) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/COGAT

Ontology that characterizes the state of current thought in cognitive science. It defines a set of mental concepts along with a set of mental tasks, and the measurement relations between those classes.

Proper citation: Cognitive Atlas Ontology (RRID:SCR_010295) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/CTCAE

A coding system for reporting adverse events that occur in the course of cancer therapy. It was derived from the Common Toxicity Criteria (CTC) v2.0 and is maintained by the Cancer Therapy Evaluation Program (CTEP) at the National Cancer Institution (NCI).

Proper citation: Common Terminology Criteria for Adverse Events (RRID:SCR_010296) Copy   

•   Source: SciCrunch Registry
  

http://sourceforge.net/apps/mediawiki/cdao/

A formalization of concepts and relations relevant to evolutionary comparative analysis, such as phylogenetic trees, OTUs (operational taxonomic units) and compared characters (including molecular characters as well as other types). CDAO is being developed by scientists in biology, evolution, and computer science

Proper citation: Comparative Data Analysis Ontology (RRID:SCR_010297) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/GCO

Ontology to define the abstract division of the total genetic information of an organism by its physical separation into different components, thereby providing a high level reference point to which more specific descriptions of the characteristics of these components can be linked.

Proper citation: Genome Component Ontology (RRID:SCR_010330) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/CARELEX

Categories and terms used to classify content (documents, images, etc) in electronic content repositories for life science / BioPharma. Initial version contains content model for use with clinical trial electronic Trial Master Files or eTMF archives. A Content model contains content classification categories (classes) and metadata properties (data properties). Data properties should be assigned to each Content Type. Recent changes include: addition of electronic signature support, medical imaging classifications.

Proper citation: Content Archive Resource Exchange Lexicon (RRID:SCR_010298) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/AAO

A structured controlled vocabulary of the anatomy of Amphibians. Note that AAO is currently being integrated into Uberon.

Proper citation: Amphibian Gross Anatomy Ontology (RRID:SCR_010291) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/HRDO

A core ontology consistent with a metamodel (disorders and groups of disorders, genes, clinical signs and their relations) and an instantiation of this metamodel with Orphanet Data (available on http://orphadata.org). Research experiments demonstrated (i) efficient classifications generation based on SPARQL Construct, (ii) perspectives in semantic audit of a knowledge base, (iii) semantic comparison with OMIM (www.omim.org) using proximity measurements and (iv) opened perspectives in knowledge sharing (LORD, http://lord.bndmr.fr). Current production services of Orphanet developed ORDO, released in 2014, an ontology synchronized with their production database.

Proper citation: Disease core ontology applied to Rare Diseases (RRID:SCR_010308) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/CPTH

Metathesaurus of current procedural terminalogy (CPT).

Proper citation: Current Procedural Terminalogy Hierarchy (RRID:SCR_010300) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/IDODEN

An ontology for dengue fever.

Proper citation: Dengue Fever Ontology (RRID:SCR_010304) Copy   

•   Source: SciCrunch Registry