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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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BD Biosciences: FACSymphony A1 Cell Analyzer Resource Report Resource Website 1+ mentions |
BD Biosciences: FACSymphony A1 Cell Analyzer (RRID:SCR_024830) | instrument resource | Analyzer applies BD FACSymphony instrument technology to reduce background noise and increase detection sensitivity. Features low-noise electronics, high-powered lasers and tight beam spot to support immunophenotyping up to 16 colors. Enables independent analysis of large and small particles on single instrument. Optional small particle detector enables detection of small particles such as extracellular vesicles, viral particle and more. Compatible with broad portfolio of catalog and custom BD Horizon Brilliant Reagents and BD FACSDiva Software. Permits easy placement on standard lab bench with its compact format. | Flow cytometer, cell analyzer, simultaneous measurement, instrument, equipment, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_024830.pdf | Model_Number_FACSymphony_A1 | SCR_024830 | BD FACSymphony A1 | 2026-09-12 01:04:32 | 2 | ||||||||
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3DHISTECH: PANNORAMIC MIDI II scanner Resource Report Resource Website 1+ mentions |
3DHISTECH: PANNORAMIC MIDI II scanner (RRID:SCR_024834) | instrument resource | Automatic digital slide scanner with 12 slide capacity in one run, fluorescence scanning, 9 physical filter cubes and 45 logical fluorescence channels. Powered by PANNORAMIC Scanner Software. Supports Carl Zeiss objectives, achieving up to 43x or 86x magnification and 0.087 µm/pixel resolution within the same instrument, along with advanced FISH scanning technique. | Automatic digital slide scanner, 12 slide capacity, fluorescence scanning, slide scanner, instrument, equipment, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024834.pdf | SCR_024834 | 3D HISTECH PANNORAMIC MIDI II, PANNORAMIC MIDI II | 2026-09-12 01:04:32 | 5 | |||||||||
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University of Texas at Austin Shared Instrumentation Facility Resource Report Resource Website |
University of Texas at Austin Shared Instrumentation Facility (RRID:SCR_026271) | access service resource, core facility, service resource | Facility provides access to and operational support for easy-to-operate equipment for sample preparation and analysis, including gel imagers, plate readers, and qPCRs. They provide training on instrument operation and grant access for independent use after completed training. | ABRF, equipment, sample preparation and analysis, gel imagers, plate readers, qPCR, training on instrument operation, |
is listed by: ABRF CoreMarketplace has parent organization: University of Texas at Austin; Texas; USA |
ABRF_2996 | https://coremarketplace.org/?FacilityID=2996&citation=1 | SCR_026271 | , Shared Instrumentation Facility, The University of Texas at Austin Shared Instrumentation Facility | 2026-09-12 01:05:01 | 0 | ||||||||
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University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases Molecular Pathology and Imaging Core Resource Report Resource Website 1+ mentions |
University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases Molecular Pathology and Imaging Core (RRID:SCR_015618) | access service resource, core facility, service resource | Core facility that provides histological services, equipment usage, and technical expertise to digestive and liver research projects. | histology, equipment, digestive, liver |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases is organization facet of: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases |
digestive disease, liver disease, pancreatic disease | NIDDK P30 DK050306 | Available to the research community | SCR_015618 | 2026-09-12 01:03:58 | 2 | ||||||||
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SP Scientific Resource Report Resource Website 1+ mentions |
SP Scientific (RRID:SCR_017367) | instrument supplier, material resource | Commercial organization located in Warminster, Pennsylvania, USA, part of SP Industries, Inc. Provides VirTis, FTS Systems, Hotpack, Hull, Genevac, and PennTech scientific equipment. Manufactures freeze drying/lyophilization, centrifugal evaporation and concentration, temperature control/thermal management, glassware washers, controlled environments, vial washing and tray loading machines., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | Manufacturer, commercial, organization, component, laboratory, equipment | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_017367 | 2026-09-12 01:04:00 | 2 | |||||||||||
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Bruker Corporation Resource Report Resource Website 1+ mentions |
Bruker Corporation (RRID:SCR_017365) | instrument supplier, material resource | Commercial organization located in Massachusetts, USA, for scientific instruments and analytical and diagnostic solutions. Bruker equipment can be used in life science molecular research, in applied and pharma applications,microscopy, nano-analysis and industrial applications. Provider of high-performance systems for cell biology, preclinical imaging, clinical phenomics and proteomics research, clinical microbiology, and for molecular pathology research. | Manufacturer, corporation, commercial, instrument, analytical, diagnostic, equipment | SCR_017365 | 2026-09-12 01:04:00 | 4 | ||||||||||||
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Rockefeller University Bio-Imaging Resource Center Core Facility Resource Report Resource Website 10+ mentions |
Rockefeller University Bio-Imaging Resource Center Core Facility (RRID:SCR_017791) | BIRC | access service resource, core facility, service resource | Provide members of University and their visitors with wide spectrum of optical microscopy equipment and extensive training in its use. | Optical, microscopy, equipment, training, service, core | Restricted | ABRF_426 | SCR_017791 | Frits and Rita Markus Bio-Imaging Resource Center | 2026-09-12 01:04:02 | 36 | ||||||||
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Chicago University Biophysics Core Facility Resource Report Resource Website 1+ mentions |
Chicago University Biophysics Core Facility (RRID:SCR_017915) | access service resource, core facility, service resource | Core provides access to biophysics equipment, integral to research community at University of Chicago.Provides tools, training, and assistance for quantitative analysis of macromolecules and their interactions. Instruments include Seahorse XFe-96 Extracellular Flux Analyzer,Jasco J-1500 CD Spectrometer,Synergy Neo HST Plate Reader,Wyatt DAWN HELEOS II SLS,Wyatt DynaPro Plate Reader DLS,Wyatt DynaPro NanoStar DLS,HORIBA Fluorolog-3,Microcal iTC200,Molecular Imager,Bio-Rad ProteOn XPR to Biacore 8K,Agilent 8453 Spectrophotometer. Core provides staff assistance in conducting experiments. | Biophysics, equipment, tool, training, assistance, quantitative, analysis, macromolecule, interaction, spectrometer, service, core, ABRF | is listed by: ABRF CoreMarketplace | Open | ABRF_802 | SCR_017915 | BioPhysics Core Facilities | 2026-09-12 01:04:05 | 8 | ||||||||
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Brown University Molecular Pathology Core Facility Resource Report Resource Website |
Brown University Molecular Pathology Core Facility (RRID:SCR_017898) | access service resource, core facility, service resource | Core provides equipment and technical expertise for evaluation of molecular and morphological changes in cells, tissues, and organs following exposure to complex environmental contaminants. Provides equipment, including automated tissue processor, paraffin embedding center, two automated microtomes, cryostat, vibratome for soft-tissue sectioning, multiheaded light microscope with projection capabilities, system for laser capture microdissection, and slide scanner with analysis software for identification and quantification of morphological structures.Offers expertise in histopathological and immunocytochemial methods, including fixation, dehydration, embedding, sectioning, histological staining, immunolabeling, high-resolution imaging, and quantitative image analysis. Services in sample preparation, offers assistance in imaging and image analysis and provides consultation for ongoing or future research projects, training program for students and investigators who use centrally available equipment. | Pathology, equipment, technical, support, molecular, morphological, changes, cell, tissue, organ, exposure, contaminant, sample, preparation, imaging, analysis, consultation, training, service, core, ABRF | is listed by: ABRF CoreMarketplace | Open | ABRF_772 | SCR_017898 | Molecular Pathology Core | 2026-09-12 01:04:05 | 0 | ||||||||
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University of Illinois at Urbana-Champaign Core Facilities at IGB Resource Report Resource Website |
University of Illinois at Urbana-Champaign Core Facilities at IGB (RRID:SCR_017938) | access service resource, core facility, service resource | Core for biological microscopy and image analysis. Offers high-end equipment,user training,ongoing support, including experiment design and data interpretation,twenty-four hour access Services,3D Printing, Transfer Files, Image Analysis,Histology,Instrument Training. | Microscopy, image, analysis, equipment, training, data, analysis, 3D, printing, histology, service, core, ABRF | is listed by: ABRF CoreMarketplace | Restricted | ABRF_881 | SCR_017938 | Core Facilities at IGB | 2026-09-12 01:04:06 | 0 | ||||||||
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Nikon: Eclipse E600 Fluorescence Microscope Resource Report Resource Website 1+ mentions |
Nikon: Eclipse E600 Fluorescence Microscope (RRID:SCR_018606) | instrument resource | Microscope equipped with CFI60 infinity optical system, providing images in all applications. Incorporates specifications adopted for CFI60 series objectives, including 60 millimeter parfocal distance, 25 millimeter thread size, and standard 22 millimeter field of view. Main components of CFI60 infinity optical system include objective, tube lens to converge light beam, and eyepiece lens to enlarge intermediate image. Fluorescence microscope that has detachable substage, 12 volt 100 watt tungsten halide lamp, filter magazine, and choice of sextuple nosepiece or sextuple DIC nosepiece.Has objectives for brightfield, darkfield, Nomarski DIC, epi fluorescence, or phase contrast techniques. | Camera, Instrument, Equipment, Nikon, USEDit, ABRF | Commercially available | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018606.pdf | , SCR_020322, SCR_020330, Model_Number_E600, SCR_018858 | https://gsecars.uchicago.edu/wp-content/uploads/2019/06/Nikon_E600-Instruction-manual.pdf | SCR_018606 | , Nikon Eclipse E600 Microscope | 2026-09-12 01:04:07 | 4 | |||||||
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University of Melbourne Biological Optical Microscopy Platform (BOMP) Core Facility Resource Report Resource Website 1+ mentions |
University of Melbourne Biological Optical Microscopy Platform (BOMP) Core Facility (RRID:SCR_018888) | BOMP | access service resource, core facility, service resource | Core provides access to fluorescence microscopy equipment including Deltavision OMX Blaze Super Resolution (3D-SIM/SMLM), Leica SP8 inverted confocal, La Vision Ultramicroscope II Lightsheet Microscope,Nikon Andor WD spinning disk, Nikon A1R inverted confocal x2, Olympus FV-MPERS Multi Photon,Olympus FV3000 inverted confocal (live cell) ISS Fast-FLIM, Perkin Elmer Operetta High Content Imaging, Zeiss LSM800 upright Airyscan, Zeiss LSM880 upright Airyscan fast, Zeiss Elyra/LSM880 inverted (live cell), super resolution (Airyscan/SMLM). Staff can help with image analysis, super resolution microscopy, fluorescence lifetime imaging microscopy, high content imaging and light sheet microscopy techniques. | Fluorescence microscopy, microscope, instrument, equipment, image analysis, imaging microscopy, light sheet microscopy, imaging, ABRF, ABRF |
uses: Zeiss LSM5 PASCAL confocal laser scanning microscope system is listed by: ABRF CoreMarketplace has parent organization: University of Melbourne; Victoria; Australia |
Open | ABRF_5666 | https://coremarketplace.org/RRID:SCR_018888/?citation=1, https://microscopy.unimelb.edu.au/ | https://research.unimelb.edu.au/facilities-and-resources/research-infrastructure/biological-optical-microscopy-platform | SCR_018888 | Biological Optical Microscopy Platform | 2026-09-12 01:04:07 | 5 | |||||
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Channelrhodopsin-2 enables optical activation of neurons Resource Report Resource Website 1+ mentions |
Channelrhodopsin-2 enables optical activation of neurons (RRID:SCR_008833) | Channelrhodopsin-2 enables optical activation of neurons | material service resource, production service resource, resource, service resource | Laser tool that enables neurons to be optically silenced by pulses of yellow light, the light-activated chloride pump halorhodopsin (Halo), in a paper entitled Multiple-color optical activation, silencing, and desynchronization of neural activity, with single-spike temporal resolution. Temporally precise, noninvasive control of activity in well-defined neuronal populations is a long-sought goal of systems neuroscience. We adapted for this purpose the naturally occurring algal protein Channelrhodopsin-2, a rapidly gated light-sensitive cation channel, by using lentiviral gene delivery in combination with high-speed optical switching to photostimulate mammalian neurons. We demonstrate reliable, millisecond-timescale control of neuronal spiking, as well as control of excitatory and inhibitory synaptic transmission. This technology allows the use of light to alter neural processing at the level of single spikes and synaptic events, yielding a widely applicable tool for neuroscientists and biomedical engineers. The quest to determine how precise neural activity patterns mediate computation, behavior, and pathology would be greatly aided by a set of tools for reliably activating and inactivating genetically targeted neurons, in a temporally precise and rapidly reversible fashion. Having earlier adapted a light-activated cation channel, 1channelrhodopsin-2 (ChR2), for allowing neurons to be stimulated by blue light, we searched for a complementary tool that would enable optical neuronal inhibition, driven by light of a second color. Here we report that targeting the 1codon-optimized form of the light-driven chloride pump halorhodopsin from the archaebacterium Natronomas pharaonis (hereafter abbreviated Halo) to genetically-specified neurons enables them to be silenced reliably, and reversibly, by millisecond-timescale pulses of yellow light. We show that trains of yellow and blue light pulses can drive high-fidelity sequences of hyperpolarizations and depolarizations in neurons simultaneously expressing yellow light-driven Halo and blue light-driven ChR2, allowing for the first time manipulations of neural synchrony without perturbation of other parameters such as spiking rates. The Halo/ChR2 system thus constitutes a powerful toolbox for multichannel photoinhibition and photostimulation of virally or transgenically targeted neural circuits without need for exogenous chemicals, enabling systematic analysis and engineering of the brain, and quantitative bioengineering of excitable cells. | hardware, instrument, equipment | has parent organization: Massachusetts Institute of Technology; Massachusetts; USA; | Anonymous donor ; MIT Media Lab ; Helen Hay Whitney Foundation |
PMID:17375185 | nlx_144630 | http://channelrhodopsin.org | SCR_008833 | 2026-09-12 01:02:01 | 3 | ||||||
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Agilent: 4200 TapeStation System Resource Report Resource Website 50+ mentions |
Agilent: 4200 TapeStation System (RRID:SCR_018435) | instrument resource | Benchtop genetic analyzer. Electrophoresis system for DNA and RNA sample quality control. It can be used for next generation sequencing or Biobank workflow. | Benchtop Genetic Analyzer, Instrument, Equipment, Agilent, USEDit, Next Generation Sequencing, ABRF, NGS | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_018435.pdf | Model_Number_4200 TapeStation, , SCR_018444, SCR_019398, SCR_019395 | https://www.agilent.com/cs/library/datasheets/public/5991-6029EN.pdf | SCR_018435 | , Agilent 4200 Tapestation Genetic Analyzer, Agilent 4200 TapeStation | 2026-09-12 01:01:07 | 63 | |||||||
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Thermo Fisher: Applied Biosystems: GeneAmp 9700 PCR Thermocycler System Resource Report Resource Website 10+ mentions |
Thermo Fisher: Applied Biosystems: GeneAmp 9700 PCR Thermocycler System (RRID:SCR_018436) | instrument resource | Automated PCR instrument for automated amplification of nucleic acids with Polymerase Chain Reaction. It has reaction volumes of up to 50 uL and sample temperature range of 4 to 99.9 C. | Matrix Assisted Laser Desorption Ionization Time of Flight Instrument, Instrument, Equipment, Applied Biosystems, USEDit, ABRF | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018436.pdf | SCR_018448, SCR_019577, Model_Number_9700 | https://assets.thermofisher.com/TFS-Assets/LSG/manuals/cms_040970.pdf | SCR_018436 | 2026-09-12 01:01:07 | 13 | ||||||||
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American Optical: 860 Sliding Microtome Resource Report Resource Website 1+ mentions |
American Optical: 860 Sliding Microtome (RRID:SCR_018434) | instrument resource | THIS REOURCE IS NO LONGER IN SERVICE. Documented on September 29,2023. Sliding microtome used for cutting hard objects such as bone, wood, frozen celloidin, and paraffin preparations. Cutting thickness is adjustable from 1 to 40 microns. | Sliding Microtome, Instrument, Equipment, American Optical, USEDit, ABRF | is listed by: USEDit | THIS REOURCE IS NO LONGER IN SERVICE | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018434.pdf | SCR_018451, SCR_019570 | https://rankinbiomed.com/wp-content/uploads/AO-860-Sliding-Microtome-Manual.pdf | SCR_018434 | 2026-09-12 01:02:56 | 1 | |||||||
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Atago: PAL-10S Pocket Refractometer Resource Report Resource Website |
Atago: PAL-10S Pocket Refractometer (RRID:SCR_018439) | instrument resource | Digital hand held pocket refractometer that measures urine specific gravity. It has measurement temperature of 10 to 35 C and sample volume of 0.3ml. | Pocket Refractometer, Instrument, Equipment, Atago, USEDit, ABRF | is listed by: USEDit | Commercially available | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018439.pdf | SCR_018449, SCR_019583, Model_Number_PAL_10S | https://www.novatech-usa.com/pdf/Atago%20PAL-10S%20Refractometer%20Datasheet.pdf | SCR_018439 | 2026-09-12 01:02:56 | 0 | |||||||
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Sutter: P-2000 Laser Micropipette Puller Resource Report Resource Website 1+ mentions |
Sutter: P-2000 Laser Micropipette Puller (RRID:SCR_018640) | instrument resource | Microprocessor controlled, CO2 laser based micropipette puller.Default configuration allows fabrication of micropipettes for intracellular recording, patch clamping, microinjection and microperfusion.Can store up to 100 separate programs, each consisting of up to 8 command lines. The five parameters set in each command line allow exquisite control of the micropipette taper geometry. Allows the use of wide range of glass diameters from 0.125 to 1.2 mm. | Laser Micropipette Puller, Instrument, Equipment, USEDit, ABRF | is listed by: USEDit | Commercially available | SCR_020537, SCR_020213, Model_Number_P2000 | https://www.sutter.com/manuals/P-2000_OpMan.pdf | SCR_018640 | 2026-09-12 01:02:56 | 3 | ||||||||
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HORNET CENTER FOR AUTONOMIC NERVE RECORDING AND STIMULATION SYSTEMS Resource Report Resource Website |
HORNET CENTER FOR AUTONOMIC NERVE RECORDING AND STIMULATION SYSTEMS (RRID:SCR_023681) | CARSS | software repository, software resource | Parylene MEA Fabrication is related to SPARC. Repository for standard fabrication procedure for Parylene C microelectrode arrays and similar devices. | Instrument, equipment, device, Parylene MEA Fabrication, microelectrode arrays, Parylene C microelectrode arrays |
is related to: SPARC Portal is related to: SPARC Request |
Free, Freely available | SCR_023681 | 2026-09-12 01:03:05 | 0 | |||||||||
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Eppendorf: Research plus 100-1000 uL 1 channel pipette Resource Report Resource Website |
Eppendorf: Research plus 100-1000 uL 1 channel pipette (RRID:SCR_023466) | instrument resource | Eppendorf manual, autoclavable, air-cushion pipette for accurate ergonomic pipetting of aqueous solutions. | Eppendorf, 100-1000 uL, one channel pipette, pipette, manual, autoclavable, instrument, equipment, USEDit | is listed by: USEDit | Restricted | SCR_023466 | Eppendorf Research® plus 100-1000 uL 1-channel pipette | 2026-09-12 01:00:39 | 0 |
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