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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
A lab organization which has bases in Munich, Germany and at Columbia University and focuses its research on protein structure and function using sequence and evolutionary information. They utilize machine learning and statistical methods to analyze genetic material and its gene products. Research goals of the lab involve using protein and DNA sequences along with evolutionary information to predict aspects of the proteins relevant to the advance of biomedical research.
Proper citation: ROSTLAB (RRID:SCR_000792) Copy
A public university in Denmark that offers degrees at the undergraduate and graduate level in fields such as engineering, nanotechnology, medicine and modern languages.
Proper citation: Aarhus University; Aarhus; Denmark (RRID:SCR_000948) Copy
International collaborative research project and database of annotated mammalian genome. Used to improve estimates of total number of genes and their alternative transcript isoforms in both human and mouse. Consortium to assign functional annotations to full length cDNAs that were collected during Mouse Encyclopedia Project at RIKEN.
Proper citation: Functional Annotation of the Mammalian Genome (RRID:SCR_000788) Copy
http://www.brown.edu/Research/Istrail_Lab/hapcompass.php
Software that utilizes a fast cycle basis algorithm for the accurate haplotype assembly of sequence data. It is able to create pairwise SNP phasings.
Proper citation: HapCompass (RRID:SCR_000942) Copy
http://sysbio.harvard.edu/csb/
A group dedicated to combining a variety of experimental and theoretical approaches to find general principles that explain the structure, behavior and evolution of cells and organisms. The center hosts a variety of fellows and faculty from various backgrounds such as biology, physics, chemistry, mathematics, computer science and engineering.
Proper citation: FAS Center For Systems Biology (RRID:SCR_000789) Copy
http://www.scienceexchange.com/facilities/macquarie-university
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 23,2023. Set of facilities based out of Macquarie University in New South Wales. Some facilities provide services such as proteome analysis or resources of various academic departments like engineering, biological sciences, and geography.
Proper citation: Macquarie University Labs and Facilities (RRID:SCR_000944) Copy
http://www.nitrc.org/projects/cbinifti/
An I/O library for Matlab/Octave Matlab and Octave library for reading and writing Nifti-1 files. cbiNifti is intended to be a small, self-contained library that makes minimal assumptions about what Nifti files should look like and allow users easy access to the raw data. cbiNifti handles compressed file formats for reading and writing, using Unix pipes for compression and decompression. More information and code examples at: http://www.pc.rhul.ac.uk/staff/J.Larsson/software.html
Proper citation: cbiNifti: Matlab/Octave Nifti library (RRID:SCR_000860) Copy
http://www.nihs.go.jp/english/
Japanese national institute that conducts testing, research, and studies toward the proper evaluation of the quality, safety, and efficacy of pharmaceutical products, foods, and numerous chemicals in the living environment. Its major responsibilities involve extensive testing and research to ensure the quality, efficacy, and safety of chemical substances (including pharmaceuticals and food) that are closely related to people's lives.
Proper citation: National Institute of Health Sciences; Tokyo; Japan (RRID:SCR_000981) Copy
http://web.ncku.edu.tw/bin/home.php?Lang=en
National Cheng Kung University is a research-led comprehensive university in Tainan, Taiwan that has undergraduate, master's, and doctoral degree programs. This university has fields of: science, engineering, medicine, management, planning and design.
Proper citation: National Cheng Kung University; Tainan; Taiwan (RRID:SCR_000980) Copy
http://www.nitrc.org/projects/cabn/
Construct and analyse brain network is a brain network visualization tool, which can help researchers to visualize construct and analyse resting state functional brain networks from different levels in a quick, easy and flexible way. Entrance parameter of construct and analyse brain network is export parameters of dparsf software.It would be greatly appreciated if you have any suggestions about the package or manual.
Proper citation: BrainNetworkConstructionAnalysisPlatform (RRID:SCR_000854) Copy
Liverpool John Moores University provides undergraduate, masters, and doctorate programs.
Proper citation: Liverpool John Moores University; Liverpool; United Kingdom (RRID:SCR_000975) Copy
http://www.hopkinsmedicine.org/som/
Johns Hopkins University School of Medicine is a medical graduate institution that provides physician, clinical fellowship and residency programs.
Proper citation: Johns Hopkins University School of Medicine; Baltimore, Maryland; USA (RRID:SCR_000973) Copy
The Max Planck Institute for Marine Microbiology is an international university that offers the PhD programme International Max-Planck Research School (IMPRS) of Marine Microbiology (Marmic) together with the Alfred Wegener Institute for Polar and Marine Research, the University of Bremen and Jacobs University Bremen. Currently, the institute consists of four departments with several associated research groups: Microbiology, Biogeochemistry, Molecular Ecology, and Symbiosis.
Proper citation: Max Planck Institute for Marine Microbiology; Bremen; Germany (RRID:SCR_000978) Copy
Montana State University is a university institute has programs for undergraduate, master's and doctoral degrees. There are 54 master's degree options, 37 doctoral degree options including one specialist program, and 14 certificate options.
Proper citation: Montana State University (RRID:SCR_000979) Copy
International Institute of Molecular and Cell Biology creates partnerships with research centers within and outside Poland. This organization provides a base of administration, management of finances and resources, sharing space and equipment, grant writing and grant management procedures, etc. They organize workshops, training courses, conferences and other scientific events for researchers of various specialties and nationalities. Additionally, this organization commercializes results to provide biotechnological solutions with regards to the global economy and global research services deals.
Proper citation: International Institute of Molecular and Cell Biology; Warsaw; Poland (RRID:SCR_000971) Copy
A public research university for science and higher education in India. The university has six main divisions, including the biological sciences, chemical sciences, electrical sciences, mechanical sciences, physical and mathematical sciences, and interdisciplinary research.
Proper citation: Indian Institute of Science; Bangalore; India (RRID:SCR_000969) Copy
A government granting agency which consults with partnered programs through national authorities and food safety agencies. EFSA organizes its annual and multi-annual work program according to priorities agreed with the European Commission and other partners, taking into account available resources. EFSA staff may also produce scientific outputs on behalf of the agency, such as peer reviews of the assessment of active substances in pesticides, or responses to urgent requests for advice. EFSA staff also monitor and analyze information and data on biological hazards, chemical contaminants, food consumption and emerging risks.
Proper citation: European Food Safety Authority (RRID:SCR_000963) Copy
Public institute of technology in Zurich, Switzerland that specializes in science, technology, mathematics and management. École Polytechnique Fédérale de Lausanne is its sister university.
Proper citation: ETH Zurich; Zurich; Switzerland (RRID:SCR_000962) Copy
A government-funded council for the promotion and coordination of biomedical research in India. The council focuses on specific diseases such as HIV/AIDS, tuberculosis, and leprosy in addition to national health priorities including the management of communicable diseases, fertility control, and mental health research.
Proper citation: Indian Council of Medical Research; New Delhi; India (RRID:SCR_000968) Copy
A public university in Shanghai, China that confers undergraduate and graduate degrees.
Proper citation: Fudan University; Shanghai; China (RRID:SCR_000965) Copy
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