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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility Resource Report Resource Website 100+ mentions |
Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility (RRID:SCR_017801) | access service resource, core facility, service resource | Core mass spec and proteomic services include open access lab for trained users with GC/MS, LC/MS, high resolution LC/MS, and MALDI-TOF instruments, help with intact protein analysis, targeted quantitation, drug discovery support, pathway analysis, protein interactions, FFPE tissue analysis, both labeled and label-free proteomics, and more. Please contact SUMS to discuss these and other custom projects including new application development. | Mass, spectrometry, proteomics, training, analysis, targeted, quantitation, drug, discovery, pathway, protein, interaction, service, USEDit, ABRF |
uses: Waters: SQD2 LC/MS system uses: Waters: Select Series Cyclic IMS uses: Thermo Fisher: Exactive Orbitrap LC/MS system uses: Thermo Fisher: LTQ XL LC/MS system uses: Thermo Fisher: Orbitrap Fusion nanoLC/MS system uses: Thermo Fisher: QE-HFX mass spectrometer uses: Thermo Fisher: Vantage LC/MS mass spectrometer uses: Stanford Sciex 7500+ Triple Quadrupole LC/MS system uses: Waters: Quattro Premier LC/MS system uses: Stanford Shimadzu 8030 LC/MS mass spectrometer uses: Bruker: Scion TQ GC/MS mass spectrometer uses: Bruker: micrOTOF-Q II LC/MS system uses: Agilent: 7890/5975 GC/MS system uses: Thermo Fisher: Orbitrap Eclipse nanoLC/MS system uses: Thermo Fisher: Exploris 480 nanoLC/MS system uses: Thermo Fisher: Exploris 240 LC/MS system uses: Waters: Andrew Pipetting Robot uses: Agilent: 6495 Triple Quadrupole LC/MS uses: Waters: Select Series MRT uses: Stanford Bruker timsTOF Ultra nanoLC/MS uses: Thermo Fisher: LTQ-Orbitrap Elite nano LC/MS system uses: Bruker: Microflex MALDI TOF mass spectrometer uses: Waters: Xevo TQ-XS mass spectrometer is listed by: ABRF CoreMarketplace has parent organization: Stanford University; Stanford; California |
NCI CA124435; NIH S10 OD026962; NIH S10 RR027425; Vincent and Stella Coates |
Open | ABRF_489 | https://coremarketplace.org/?FacilityID=489 | SCR_017801 | Vincent Coates Foundation Mass Spectrometry Laboratory | 2026-08-29 11:33:15 | 117 | ||||||
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Northwestern University Cancer Center Flow Cytometry Core Facility Resource Report Resource Website |
Northwestern University Cancer Center Flow Cytometry Core Facility (RRID:SCR_017766) | access service resource, core facility, service resource | Provides 6 cell sorters and 5 benchtop analyzers. Helps investigators to define their projects in the early stages of development to make optimal and efficient use of flow cytometry. Educates ALL users (faculty and staff) in the science and technology of flow cytometry. | Flow, cytometry, analysis, training, service, core | NCI CA060553; NIH Office of the Director S10 OD011996 |
Restricted | ABRF_315 | SCR_017766 | Robert H. Lurie Comprehensive Cancer Center Flow Cytometry Core Facility | 2026-08-29 11:32:59 | 0 | ||||||||
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Northwestern University School of Medicine Lurie Cancer Center Pathology Core Facility Resource Report Resource Website 1+ mentions |
Northwestern University School of Medicine Lurie Cancer Center Pathology Core Facility (RRID:SCR_017769) | PCF | access service resource, core facility, service resource | Centralized, comprehensive, core laboratory providing histology, immunohistochemistry, molecular analysis and extraction and microscopic evaluation services for human tissue-based studies. Serves integral marker studies that require biomarker-based treatment arm assignment. Performs procurement of fresh biospecimens for clinical trials and biobanking. | Pathology, histology, immunohistochemistry, molecular, analysis, extraction, microscopic, evaluation, human, tissue, biobanking, service, core | NCI CA060553 | ABRF_333 | SCR_017769 | Pathology Core Facility | 2026-08-29 11:32:59 | 3 | ||||||||
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North Carolina University at Chapel Hill R.L. Juliano Structural Bioinformatics Core Facility Resource Report Resource Website |
North Carolina University at Chapel Hill R.L. Juliano Structural Bioinformatics Core Facility (RRID:SCR_017836) | access service resource, core facility, service resource | Core provides consultations and collaborations on research studies requiring computational structural biology methods. Analyses available are to study of static structures, molecular dynamics studies for analyzing contribution of dynamic and collective motions to macromolecular functionality. Trains researchers in computational structural biology techniques, or works in collaborative manner with researchers.Provides access to software tools for protein and DNA sequence analysis, protein fold determination, homology modeling, active site identification, and analysis of effects of various mutations on structure and function of protein, along with additional computational analyses. | Computational, structural, biology, method, analysis, training, service, core, ABRF | is listed by: ABRF CoreMarketplace | NCI P30 CA016086 | Open | ABRF_628 | SCR_017836 | R. L. Juliano Structural Bioinformatics Core facility at UNC-Chapel Hill | 2026-08-29 11:33:01 | 0 | |||||||
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North Carolina University at Chapel Hill School of Medicine Biomolecular NMR Laboratory Core Facility Resource Report Resource Website |
North Carolina University at Chapel Hill School of Medicine Biomolecular NMR Laboratory Core Facility (RRID:SCR_017841) | access service resource, core facility, service resource | Core to support academic and industrial users. Spectrometer time is available to trained users for an hourly fee. Lab manager trains new users, consults to determine whether NMR will be useful in their research, and helps design experimental plan to obtain information they need. Manager also operates spectrometer for users whose experiments do not justify time and expense of individual training. | Biomolecular, NMR, laboratory, spectrometer, training, experimental, design, service, core, ABRF | is listed by: ABRF CoreMarketplace | Cancer Center Support Gran ; NCI P30 CA016086; UNC University Cancer Research Fund |
Open | ABRF_625 | SCR_017841 | UNC Biomolecular NMR Laboratory, NMR Spectroscopy | 2026-08-29 11:33:18 | 0 | |||||||
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North Carolina University at Chapel Hill School of Medicine Protein Expression and Purification Core Facility Resource Report Resource Website |
North Carolina University at Chapel Hill School of Medicine Protein Expression and Purification Core Facility (RRID:SCR_017843) | access service resource, core facility, service resource | Core specializes in production of pure, functional proteins for structural, biophysical, and biochemical studies. Facility offers three categories of service:Protein Expression,Protein Purification,Scientific Consultation, Mentoring, and Training; Offers Isotope labeled proteins for NMR;High production scales for immunizations, drug discovery, structural biology;Endotoxin-free protein production;Stable cell line generation;Expert baculovirus expression;Custom packages to efficiently suit your needs. | Production, protein, expression, purification, consultation, training, isotope, labeled, immunization, drug, discovery, cell, line, generation, custom, service, core, ABRF | is listed by: ABRF CoreMarketplace | NCI P30 CA016086 | Open | ABRF_627 | SCR_017843 | Protein Expression and Purification | 2026-08-29 11:33:01 | 0 | |||||||
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University of California Davis Flow Cytometry Shared Resource Laboratory Core Facility Resource Report Resource Website |
University of California Davis Flow Cytometry Shared Resource Laboratory Core Facility (RRID:SCR_017826) | access service resource, core facility, service resource | Core provides access to expertise and instrumentation for analytical flow cytometry, cell sorting and laser scanning cytometry.Cell sorting and analytical cytometers are located at three sites in Davis and Sacramento for research use on recharge basis. Provides cell sorters for assisted sorting on appointment basis and provides training to investigators in acquiring data on analytic cytometers.Can advise on experiment design for flow cytometry, provides training to enable independent use of analytical cytometers, and familiarize investigators with popular data analysis software tools such as BD Diva and CellQuest, FlowJo, ModFit and iBrowser. | Flow, cytometry, laser, scanning, cell, sorting, data, analysis, training, service, core, ABRF, USEDit |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of California at Davis; California; USA |
NCI P30CA093373 | Open | ABRF_612 | SCR_017826 | UC Davis Flow Cytometry Shared Resource Laboratory, University of California Davis Health Flow Cytometry Shared Resource Laboratory Core Facility | 2026-08-29 11:33:15 | 0 | |||||||
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University of Virginia School of Medicine Flow Cytometry Core Facility Resource Report Resource Website 100+ mentions |
University of Virginia School of Medicine Flow Cytometry Core Facility (RRID:SCR_017829) | access service resource, core facility, service resource | Services include unassisted and assisted sample acquisition, cell sorting, mass cytometry (CyTOF), Luminex cytokine assays, antibody conjugation and data analysis. | Sample, acquisition, cell, sorting, mass, cytometry, CyTOF, Luminex, cytokine, assay, antibody, conjugation, data, analysis, service, core, ABRF | is listed by: ABRF CoreMarketplace | NCI P30 CA044579 | Restricted | ABRF_611 | SCR_017829 | Virginia University School of Medicine Flow Cytometry Core Facility, UVA Flow Cytometry Core Facility, Flow Cytometry Facility | 2026-08-29 11:33:15 | 100 | |||||||
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New York University School of Medicine Langone Health Proteomics Laboratory Core Facility Resource Report Resource Website 10+ mentions |
New York University School of Medicine Langone Health Proteomics Laboratory Core Facility (RRID:SCR_017926) | access service resource, core facility, service resource | Core offers specialized expertise for analysis of proteins and peptides using mass spectrometry. Develops new methods and customized approaches for proteomic analysis and suggests experimental strategies and sample preparation prior to mass spectrometry analysis. Services include:comprehensive protein identification ,analysis of affinity purified complexes,characterizing protein post-translational modifications,de novo sequencing,label and label-free quantitation ,multiplexed quantitation global phosphorylation and ubiquitin analysis,analysis of laser-capture microdissected formalin-fixed paraffin-embedded tissue,secretome analysis,crosslinking analysis,disulfide mapping. | Analysis, protein, peptide, mass, spectrometry, proteomics, sample, preparation, de novo sequencing, quantitation, serice, core, ABRF, USEDit |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: New York University School of Medicine; New York; USA |
NCI P30 CA016087 | ABRF_820 | https://coremarketplace.org/?FacilityID=820&citation=1 | SCR_017926 | New York University School of Medicine Langone Health Proteomics Laboratory, Proteomics Laboratory | 2026-08-29 11:33:03 | 12 | |||||||
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Chicago University Integrated Small Animal Imaging Research Resource Core Facility Resource Report Resource Website 1+ mentions |
Chicago University Integrated Small Animal Imaging Research Resource Core Facility (RRID:SCR_017923) | iSAIRR | access service resource, core facility, service resource | Core offers imaging modalities, techniques, and services for in vivo imaging of small animals and ex vivo imaging of tissue/organ specimens. iSAIRR sub-cores feature magnetic resonance imaging and spectroscopy (MRIS); optical imaging (bioluminescence and fluorescence); positron emission tomography, single photon emission computed tomography, and computed tomography (PET/SPECT/CT).Services include Assistance with experimental design,Assisted and/or independent image acquisition,Veterinary support for all imaging modalities,Assistance with data processing and interpretation. | Imaging, in vivo, small, animal, ex vivo, tissue, organ, magnetic, resonance, spectroscopy, optical, positron, emission, tomography, single, photon, coputed, tomography, data, veterinarian, support, service, core, ABRF | is listed by: ABRF CoreMarketplace | NCI P30 CA014599 | Open | ABRF_805 | SCR_017923 | Integrated Small Animal Imaging Research Resource | 2026-08-29 11:33:17 | 2 | ||||||
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New York University School of Medicine Langone Health Microscopy Laboratory Core Facility Resource Report Resource Website 100+ mentions |
New York University School of Medicine Langone Health Microscopy Laboratory Core Facility (RRID:SCR_017934) | access service resource, core facility, service resource | Core offers comprehensive light and electron microscopy technologies. Our scientists use light microscopes and electron microscopes at resolutions ranging from centimeters to angstroms, providing clear and detailed images.We assist at every stage of your experiment, offering research-design consultation and instrument training, as well as guidance in study execution, analysis, and presentation for publication. | Microscopy, light, electron, image, training, experiment, consultation, analysis, service, core, ABRF, USEDit |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: New York University School of Medicine; New York; USA |
NCI CA016087; NCRR RR023704; NCRR RR024708; NIH Office of the Director OD019974; NIH A1080192 |
Open | ABRF_366 | https://coremarketplace.org/?FacilityID=366 | SCR_017934 | NYU Langone Microscopy Laboratory | 2026-08-29 11:33:19 | 142 | ||||||
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Massachusetts Institute of Technology Swanson Biotechnology Center Nanotechnology Materials Core Facility Resource Report Resource Website 10+ mentions |
Massachusetts Institute of Technology Swanson Biotechnology Center Nanotechnology Materials Core Facility (RRID:SCR_018674) | access service resource, core facility, service resource | Provides instruments for materials and nanomaterials research and full service TEM and cryoTEM sample preparation and imaging. Conducts CLEM and cryoCLEM workflows utilizing cryoFluorescence, cryoSEM and cryoFIB with focus on bio samples.Provides equipment and expertise to work with nanomaterials for characterization and imaging purpose. Core imaging capabilities include high performance field emission transmission electron microscope equipped with STEM, EELS, EDS and cryo-imaging, high performance field emission scanning electron microscope and focused ion beam equipped with STEM and cryo-imaging, cryo-fluorescent confocal microscope for CLEM workflows, and atomic force microscope equipped with liquid cell. Instrumentation for material characterization includes high throughputdynamic light scattering, nanoparticle sizing and counting, and rheometry. | USEDit, material research, nanomaterial, cryo imaging, cryo fluorescenct confocal microscope, cryoSEM, cryoFIB, imaging, electron microscope, atomic force microscope, light scattering, nanoparticle sizing, rheometry, ABRF, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: Massachusetts Institute of Technology; Massachusetts; USA; |
NCI P30 CA14051 | Open | ABRF_767 | https://coremarketplace.org/?FacilityID=767, https://ki.mit.edu/sbc/nanocore/fees | SCR_018674 | Bio and CryoEM in the Nanotechnology Materials Core | 2026-08-29 11:33:20 | 30 | ||||||
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University of Hawaii at Manoa Cancer Center Genomics and Bioinformatics Shared Resource Core Facility Resource Report Resource Website 1+ mentions |
University of Hawaii at Manoa Cancer Center Genomics and Bioinformatics Shared Resource Core Facility (RRID:SCR_019085) | GBSR | access service resource, core facility, service resource | Core offers central service that uses genomic technologies combined with expert data analysis.Provides genomic analyses and bioinformatics as well as technical and scientific consultation,collaboration and initial data interpretation to all UH faculty with priority given to Cancer Center members with federal funding for cancer related projects. Offers expertise in molecular biology, genetics, genomics and bioinformatics, and can provide project planning, advice, and troubleshooting at all phases of the project.Genomic analysis services include DNA/RNA isolation, plating, and quality analysis, custom genotyping, Real-Time qPCR-based gene expression, copy number and methylation assays, pyrosequencing, Affymetrix and Illumina microarray based assays,Next Generation Sequencing on NextSeq500, iSeq100, NanoString nCounter analysis. | USEDit, genomic technologies, data analysis, DNA/RNA isolation, plating, and quality analysis, custom genotyping, Real-Time qPCR-based gene expression, copy number and methylation assays, pyrosequencing, ABRF, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: University of Hawaii at Manoa |
NCI P30 CA071789 | Restricted | ABRF_787 | https://coremarketplace.org/?FacilityID=787 | SCR_019085 | UHCC Genomics and Bioinformatics Shared Resource, University of Hawaii at Manoa UHCC Genomics and Bioinformatics Shared Resource | 2026-08-29 11:33:06 | 9 | |||||
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North Carolina University at Chapel Hill Nanomedicines Characterization Core Facility Resource Report Resource Website 1+ mentions |
North Carolina University at Chapel Hill Nanomedicines Characterization Core Facility (RRID:SCR_017951) | access service resource, core facility, service resource | Core provides physicochemical characterization of nanoscale entities. Offers characterization of several classes of nanomaterials:Polymer conjugates,Polymeric micelles,Liposomes,Nanogels,Polyion complexes of small drugs and biomacromolecules (proteins, DNA, and RNA),Inorganic/metal nanoparticles,Bio-derived nanoparticles such as exosomes with protein and nucleic acid cargo. | Physicochemical, characterization, nanoscale, nanomaterial, polymer, conjugate, micelle, liposome, nanogel, polyion, complex, drug, protein, DNA, RNA, inorganic, metal, particle, service, core, ABRF | is listed by: ABRF CoreMarketplace | NCI P30 CA016086 | Open | ABRF_983 | SCR_017951 | Nanomedicines Characterization Core Facility | 2026-08-29 11:33:20 | 2 | |||||||
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Northwestern University School of Medicine Structural Biology Core Facility Resource Report Resource Website 1+ mentions |
Northwestern University School of Medicine Structural Biology Core Facility (RRID:SCR_017952) | access service resource, core facility, service resource | Core provides equipment, training, technical support, and maintenance of equipment for studying structures of biological macromolecules and materials. Serves with expertise in structural and computational biology. Services offered include Macromolecular Structure Determination and Analysis,Macromolecular crystallography at LS-CAT,Robotics equipment for crystallization experiments,UV crystal imaging capabilities,Software for structure analysis,Graphics facilities for visualization/presentation of molecular structures,Computer servers specialized for structural biology calculationss,Support and Training ,X-ray crystallography, from designing crystallization experiments to structure determination and refinemen,Molecular graphics for analysis and presentation,CryoEM and EM training.Resources Available:Crystallography Art Robbins, Inc. Phoenix and Gryphon crystallization robots,TTP Labtech Dragonfly liquid handler for crystal tray setup,Jansi UVEX UV/Vis microscope/imaging system,Stereomicroscopes (camera equipped, at room temperature and 4 degrees C),Incubators for temperature-controlled crystallization,Coordination of access to LS-CAT for Northwestern University users,CryoEM,JEOL 3200FS TEM equipped with in-column energy filter (omega filter), field emission gun capable of operating at 200 or 300 kV and Gatan K2 Summit Direct Electron Detector,JEOL 1400 with Gatan 4k x 4k Ultrascan CCD camera,Solarus Plasma Cleaner and Pelco easyGlow Discharge Cleaning System,Cressington 308R carbon coater,Gatan Cryoplunge 3 and FEI Vitrobot Mark IV,Gatan 626 cryoholders with 655 Turbo pump stations.Resources available Computational:50+ node cluster running Linux including several single- and multi-GPU nodes,7 Quad-core Intel Xeon 3.4GHz workstations (3D stereo equipped for visualization and model building) 3 Dual Quad-core Intel Xeon 3.5GHz workstations with GPU computing capabilities (3D stereo equipped for visualization, model building, and GPU computing),LTO6 writers for quick data backup,45 tape LTO6 system for continuous data backup,Over 200 Tb of disk storage including RAID systems,10 Gigabit fiber Ethernet connection to APS.Software Crystallography,CCP4 suite,PHENIX,SHARP,SOLVE,HKL2000,XDS,CryoEM,CryoSparc,Relion3,Leginon,cisTEM,Appion,NMR,CNS,FELIX,Aria Modeling, graphics, and simulations,COOT,Pymol,Chimera,APBS,GROMACS,AMBER,VMD/NAMD. | Medical, structural, biological, macromolecule, material, equipment, training, support, analysis, crystallography, UV, imaging, X-ray, service, core, ABRF | is listed by: ABRF CoreMarketplace | NCI P30 CA060553 | ABRF_946 | SCR_017952 | Structural Biology Core | 2026-08-29 11:33:03 | 2 | ||||||||
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GenVisR Resource Report Resource Website 10+ mentions |
GenVisR (RRID:SCR_027559) | software resource, software toolkit | Software R package for visualizing genomics data. Provides a user-friendly, flexible and comprehensive suite of tools for visualizing complex genomic data in three categories (small variants, copy number alterations and data quality) for multiple species of interest. | visualizing genomics data, genomics, genomics data, small variants, copy number alterations, data quality, multiple species, | NCI K22CA188163; NHGRI K99HG007940 |
PMID:27288499 | Free, Available for download, Freely available | SCR_027559 | 2026-08-29 11:35:19 | 42 | |||||||||
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BayesPrism Resource Report Resource Website 10+ mentions |
BayesPrism (RRID:SCR_027499) | software resource, software toolkit, source code | Software R package for fully Bayesian inference of tumor microenvironment composition and gene expression deconvolution. Used to analyze bulk RNA-seq data and estimate cell type-specific expression profiles. | tumor microenvironment composition, gene expression deconvolution, analyze bulk RNA-seq data, estimate cell type-specific expression profiles, | NCI U2C CA288284; NCI U54 CA209975; NHGRI R01 HG009309 |
PMID:35469013 | Free, Available for download, Freely available | SCR_027499 | 2026-08-29 11:35:16 | 14 | |||||||||
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CytoSPACE Resource Report Resource Website 10+ mentions |
CytoSPACE (RRID:SCR_027634) | software application, software resource, source code | Software tool for assigning single cells from scRNA-seq to spatial transcriptomics coordinates via optimization framework. Supports high-resolution cell/spot alignment, capacity-constrained/domain-aware placement, and outputs per-cell/per-spot assignments and probabilities for downstream visualization and analysis. Used for optimal mapping of scRNA-seq data to spatial transcriptomics data. | Optimal mapping of scRNA-seq data to spatial transcriptomics data, assigning single cells from scRNA-seq, spatial transcriptomics coordinates, optimization framework, mapping, scRNA-seq data, spatial transcriptomics data, | American Association for Cancer Research ; Donald E. and Delia B. Baxter Foundation ; NCI R00CA187192; NCI R01CA255450; NCI R21CA238971; Norwegian Cancer Society ; Virginia and D. K. Ludwig Fund for Cancer Research |
PMID:36879008 | Free, Available for download, Freely available | https://github.com/digitalcytometry/cytospace | SCR_027634 | 2026-08-29 11:35:32 | 10 | ||||||||
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METAFlux Resource Report Resource Website 1+ mentions |
METAFlux (RRID:SCR_028022) | software application, software resource, source code | Software tool that predicts cancer metabolic fluxes from bulk RNA-seq and scRNA-seq data to address these analytic gaps. Used for characterizing metabolic circuits and output non-degenerative fluxes using cancer gene expression data. | predict cancer metabolic fluxes, RNA-seq data, scRNA-seq data, characterizing metabolic circuits, non-degenerative fluxes, cancer gene expression data, | Chan Zuckerberg Initiative ; MD Anderson Moonshot programs ; NCI P30 CA016672; NCI U01CA247760; Silicon Valley Community Foundation |
PMID:37573313 | Free, Available for download, Freely available | SCR_028022 | 2026-08-29 11:35:35 | 6 | |||||||||
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BISCUIT Resource Report Resource Website 1+ mentions |
BISCUIT (RRID:SCR_028006) | software resource, software toolkit | Software application for simultaneous genetic and epigenetic inference in bulk and single-cell studies. Used to perform alignment, DNA methylation and mutation calling, and allele specific methylation from bisulfite sequencing data. Analyzing sodium bisulfite conversion-based DNA methylation/modification data. | simultaneous genetic and epigenetic inference, analyzing sodium bisulfite conversion-based DNA methylation/modification data, perform alignment, DNA methylation, mutation calling, allele specific methylation, bisulfite sequencing data, | NCI R37CA230748; NCI U24CA264023; NIGMS R35GM146978 |
PMID:38412294 | Free, Available for download, Freely available | SCR_028006 | , BISulfite-seq CUI Toolkit, BISulfite-seq CUI Toolkit (BISCUIT) | 2026-08-29 11:35:34 | 2 |
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