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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Imspector Resource Report Resource Website 50+ mentions |
Imspector (RRID:SCR_018863) | data analysis software, data processing software, software application, software resource | Software tool for real time analysis and data visualization. Software system for experimental control and quantitative data analysis in microscopy and spectroscopy.Integration of data processing and acquisition allows real time analysis and visualization of experimental results. | Data analysis, real time data, visualization, quantitative analysis, microscopy, spectroscopy | Free, Freely available | https://github.com/AbberiorInstruments/ImspectorDocs/blob/master/docs/intro.rst, https://imspector.abberior-instruments.com/ | SCR_018863 | 2026-09-19 12:53:59 | 85 | ||||||||||
|
Repetier Host Resource Report Resource Website 10+ mentions |
Repetier Host (RRID:SCR_018901) | 3d visualization software, data processing software, data visualization software, software application, software resource | Open source 3D printing software which supports multi part printing and has slicers. | 3D printing, multi part printing support, slicer, data visualization, 3D visualization | Free, Available for download, Freely available | SCR_018901 | Repetier-Host | 2026-09-19 12:54:00 | 41 | ||||||||||
|
Sutter: Movable Objective Microscope Resource Report Resource Website 1+ mentions |
Sutter: Movable Objective Microscope (RRID:SCR_018860) | MOM | instrument resource | Two photon microscope capable of imaging deep within living specimens when combined with Ti:Sapphire Laser. Provides 3D objective movement and rotation allowing specimen to remain stationary. | Sutter Instruments, two photon microscope, imaging, living specimen, 3D objective movement, 3D objective rotation, stationary speciment, custom design, instrument, equipment, microscope | is listed by: USEDit | Restricted. | SCR_018860 | Movable Objective Microscope (MOM), Sutter MOM | 2026-09-19 12:53:59 | 5 | ||||||||
|
TRACESPipe Resource Report Resource Website 1+ mentions |
TRACESPipe (RRID:SCR_018831) | data analysis software, data processing software, sequence analysis software, software application, software resource | Software tool as hybrid pipeline for reconstruction and analysis of viral and host genomes at multi-organ level. Pipeline for identification, assembly, and analysis of viral genomes, that combine DNA sequence data from multiple organs. Cooperation between compression based prediction, sequence alignment, and de-novo assembly. Provides transmission and storage of data. | Hybrid pipeline, genome reconstruction, genome analysis, viral genome, host genome, multi organ sequencing, multi organ level, DNA sequence data, multiple organ data, bio.tools |
is listed by: bio.tools is listed by: Debian |
DOI:10.5524/100771 | Free, Freely available | biotools:tracespipe | http://dx.doi.org/10.5524/100771, https://bio.tools/tracespipe | SCR_018831 | 2026-09-19 12:53:59 | 2 | |||||||
|
Simple Assignment of Spots to Surfaces Resource Report Resource Website 1+ mentions |
Simple Assignment of Spots to Surfaces (RRID:SCR_018797) | SASS | data analysis software, data processing software, software application, software resource | Software tool as custom analysis code combining single-cell traces and spot detection from live imaging movies and using Imaris output. | Custom analysis, single cell trace, spot detection, live imaging movie, assign spots, Imaris detection, expression domain, cell distance |
uses: Imaris has parent organization: University of Manchester; Manchester; United Kingdom |
DOI:10.1101/837179 | Free, Available for download, Freely available | SCR_018797 | 2026-09-19 12:53:58 | 7 | ||||||||
|
Harvard Apparatus: Inspira Advanced Safety Ventilator, Volume Controlled Resource Report Resource Website |
Harvard Apparatus: Inspira Advanced Safety Ventilator, Volume Controlled (RRID:SCR_018834) | instrument resource | Volume Controlled Ventilator delivers desired tidal volume to animal by precisely controlling stroke of piston. Since actual stroke length may be modified for given stroke, sigh breaths are supported. | Volume controlled ventilator, ventilator, tidal volume delivery, piston stroke control, instrument, equipment | is listed by: USEDit | https://www.harvardapparatus.com/media/harvard/pdf/Inspira_557058_9.pdf | SCR_018834 | Volume Controlled, Inspira Advanced Safety Ventilator | 2026-09-19 12:53:59 | 0 | |||||||||
|
ADInstruments: PowerLab/4SP acquisition system Resource Report Resource Website 10+ mentions |
ADInstruments: PowerLab/4SP acquisition system (RRID:SCR_018833) | instrument resource | Integrated system of hardware and software designed to record, display, and analyse experimental data. Consists of PowerLab recording unit and possible ancillary devices, software that run on computer to which PowerLab is connected. PowerLab/4SP has four inputs for recording external signals. | Record data, display data, analyse experimental data, recording unit, integrated system, ADInstruments | Restricted | https://m-cdn.adinstruments.com/owners-guides/PowerLab%20SP%20Series%20OG.pdf | SCR_018833 | PowerLab/4SP | 2026-09-19 12:53:59 | 10 | |||||||||
|
Millar: PCU-2000 Pressure Control Unit with Patient Isolation Resource Report Resource Website 1+ mentions |
Millar: PCU-2000 Pressure Control Unit with Patient Isolation (RRID:SCR_018840) | instrument resource | Pressure Control Unit is two channel, patient isolated, line powered bridge amplifier for connecting one or two single sensor Millar Mikro-Tip catheters to clinical patient monitor or standalone data acquisition system. Provides built in ridge excitation eliminating need for separate bridge amplifier. Analog output signal level of 1V/100 mmHg is compatible with most pressure monitors and data acquisition systems. In line power supply adapts automatically to line voltages from 100 to 240 volts AC. | Millar, PCU-2000, pressure control unit, patient isolation, amplifier, clinical patient monitor, catherer connector, equipment, instrument | is listed by: USEDit | Restricted | SCR_018892 | https://www.artisantg.com/Scientific/75461-1/Millar-PCU-2000-Dual-Channel-Pressure-Control-Unit-With-Patient-Isolation, https://www.artisantg.com/info/Millar_PCU_2000_Manual.pdf | SCR_018840 | PCU-2000 Dual Channel Pressure Control Unit, PCU-2000 Pressure Control Unit | 2026-09-19 12:53:59 | 1 | |||||||
|
CED: Micro1401-4 data acquisition unit Resource Report Resource Website 1+ mentions |
CED: Micro1401-4 data acquisition unit (RRID:SCR_018846) | instrument resource | Unit records waveform data, digital event and marker information and can simultaneously generate waveform and digital outputs in real time for multi tasking experimental control. | data acquisition unit, cost effective data acquisition, waveform data recording, digital event, marker information, real time, instrument, equipment | is listed by: USEDit | Restricted | https://ced.co.uk/img/Micro4en.pdf | SCR_018846 | Cost effective Data Acquisition Unit (CED) | 2026-09-19 12:53:59 | 4 | ||||||||
|
Robetta Resource Report Resource Website 100+ mentions |
Robetta (RRID:SCR_018805) | analysis service resource, data access protocol, production service resource, service resource, software resource, web service | Web tool as protein structure prediction service. Provides automated structure prediction and analysis tools that can be used to infer protein structural information from genomic data. Produces model for entire protein sequence in presence or absence of sequence homology to protein of known structure. | Protein structure prediction, protein, structure prediction, prediction service, automated prediction, analysis tools, genomic data, protein sequence, protein model, bio.tools |
is listed by: Debian is listed by: bio.tools has parent organization: University of Washington; Seattle; USA |
PMID:15215442 | Restricted | biotools:robetta | https://bio.tools/robetta | SCR_018805 | 2026-09-19 12:53:58 | 487 | |||||||
|
FALCON Resource Report Resource Website 100+ mentions |
FALCON (RRID:SCR_018804) | analysis service resource, data access protocol, production service resource, service resource, software resource, web service | Web tool as high throughput protein structure prediction service. High throughput server for protein structure prediction. | Protein structure, protein structure prediction, simulation, 3D structure, protein, high throughput protein, structure prediction | Restricted | SCR_018804 | FALCON@home | 2026-09-19 12:53:58 | 432 | ||||||||||
|
WEBMAXC EXTENDED Resource Report Resource Website 10+ mentions |
WEBMAXC EXTENDED (RRID:SCR_018807) | analysis service resource, data access protocol, production service resource, service resource, software resource, web service | Web tool for computing metal ion concentrations in physiological solutions. Used for determining free metal concentration in presence of chelators or total metal given desired free concentration. | Metal ion concentration, physiological solution, free metal concentration, chelator, free concentration, free metal concentration calculation |
is related to: MAXCHELATOR has parent organization: Stanford University; Stanford; California |
Free, Freely available | SCR_018807 | WEBMAXC Extended | 2026-09-19 12:53:58 | 24 | |||||||||
|
Ripple Neuro: Grapevine Neural Interface Processor Resource Report Resource Website 1+ mentions |
Ripple Neuro: Grapevine Neural Interface Processor (RRID:SCR_018897) | instrument resource | Interface processor as 512 channel stimulation and recording electrophysiology tool. Designed to be safe for human subjects. | Ripple Neuro, Grapevine processor, Ripple product, neural interface processor, processor, electrophysiology recorder, equipment, instrument | is listed by: USEDit | Restricted | SCR_018897 | 2026-09-19 12:54:00 | 3 | ||||||||||
|
C-IMMSIM Resource Report Resource Website 1+ mentions |
C-IMMSIM (RRID:SCR_018775) | data access protocol, service resource, software resource, web service | Web prediction tool for molecular binding in simulation of immune system. Agent based simulator of immune response that represents pathogens, as well as lymphocytes receptors, by means of their amino acid sequences and makes use of bioinformatics methods for T and B cell epitope prediction.Calculates immune response to generic pathogenic secondary structure. Allows users to submit antigen protein sequence and specify schedule of its injection as well as host haplotype. | Molecular binding prediction, molecular binding simulation, immune system, pathogen, lymphocyte receptor, amino acid sequence, T cell epitope prediction, B cell epitope prediction, calculate immune response, generic pathogenic secondary structure, antigen protein sequence, host haplotype, immunogenic part, invading pathogen | European Community | PMID:20419125 | Restricted | SCR_018775 | 2026-09-19 12:53:58 | 5 | |||||||||
|
ODAM Resource Report Resource Website 1+ mentions |
ODAM (RRID:SCR_018774) | data access protocol, data management software, software application, software repository, software resource, web service | Software experimental data table management system to make research data accessible and available for reuse with minimal effort on part of data provider. Allows any scientist or data researcher to be able to explore dataset and then extract some or all of data according to their needs. Designed to manage experimental data tables in quick and easy way for users. | Experimental data tables, research data management, OpenAPI, FAIR Data principles, assessment, EDTMS, data management, bio.tools |
is listed by: Debian is listed by: bio.tools |
Free, Available for download, Freely available | BioTools:ODAM, biotools:ODAM | https://bio.tools/ODAM, https://bio.tools/ODAM, https://bio.tools/ODAM, https://bio.tools/ODAM | SCR_018774 | Open Data for Access and Mining | 2026-09-19 12:53:58 | 3 | |||||||
|
Leica: DM4000 B Microscope Resource Report Resource Website 1+ mentions |
Leica: DM4000 B Microscope (RRID:SCR_018895) | instrument resource | Fluorescent microscope which supports fluorescence contrast techniques. This product is archived and has been replaced by the Leica DM4000 B LED. | Leica, fluorescent microscope, DM4000 B, microscope, instrument, equipment | is listed by: USEDit | Restricted | https://meyerinst.com/library/uploads/dm4000b.pdf | SCR_018895 | 2026-09-19 12:54:00 | 1 | |||||||||
|
Millar: MPVS Ultra Pressure Volume Loop System Resource Report Resource Website |
Millar: MPVS Ultra Pressure Volume Loop System (RRID:SCR_018894) | instrument resource | Pressure volume loop system with seven available volume segments, range of gain settings, integrated internal ECG circuit and dual pressure amplifiers. System can be used in either large or small animal subjects, depending on which size catheter is used. | Millar, ultra pressure, pressure volume loop system, instrument, equipment | is listed by: USEDit | Restricted | SCR_018894 | Pressure Volume Loop System | 2026-09-19 12:54:00 | 0 | |||||||||
|
Scalable Analytics for Brain Exploration Research Resource Report Resource Website 1+ mentions |
Scalable Analytics for Brain Exploration Research (RRID:SCR_018812) | SABER, saber | data processing software, software application, software library, software resource, software toolkit, workflow software | Library of containerized tools and workflow deployment system for enabling processing of large neuroimaging datasets. Provides canonical neuroimaging workflows specified in standard workflow language (CWL), integration with workflow execution engine (Airflow), imaging database (bossDB), and parameter database (Datajoint) to deploy workflows at scale, and tools to automate deployment and optimization of neuroimaging pipelines. | Running containerized workflow, large neuroimaging datasets, canonical neuroimaging workflow, neuroimaging pipeline deployment, neuroimaging pipeline optimization | is related to: Brain Observatory Storage Service and Database (BossDB) | NIMH R24 MH114799 | DOI:10.1101/615161v1.full | Free, Available for download, Freely available | SCR_018812 | 2026-09-19 12:53:59 | 1 | |||||||
|
PHD SECONDARY STRUCTURE Resource Report Resource Website 1+ mentions |
PHD SECONDARY STRUCTURE (RRID:SCR_018778) | data access protocol, service resource, software resource, web service | Web tool for secondary structure prediction. Used for network protein sequence analysis. | Secondary structure prediction, network protein, protein sequence analysis, protein sequence, secondary structure predictor | Free, Freely available | SCR_018778 | 2026-09-19 12:53:58 | 2 | |||||||||||
|
Muscle X Resource Report Resource Website 1+ mentions |
Muscle X (RRID:SCR_018811) | data analysis software, data processing software, image analysis software, software application, software resource, software toolkit | Software suite as collection of programs intended to assist with analyzing diffraction X-ray images. MuscleX diffraction X-ray image analyzing toolkit. Data reduction software for X-ray fiber diffraction data. | Diffraction analysis, x ray image, diffraction X-Ray image analysis, X-ray data, X-ray fiber diffraction data, data analysis, data reduction | has parent organization: Illinois Institute of Technology; Illinois; USA | Free, Available for download, Freely available | https://sourceforge.net/projects/musclex/files/ | SCR_018811 | MuscleX, Muscle X 1.14.12 | 2026-09-19 12:53:59 | 5 |
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