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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
R/QTLDESIGN
 
Resource Report
Resource Website
1+ mentions
R/QTLDESIGN (RRID:SCR_013424) software application, software resource Software application to help plan quantitative trait locus (QTL) experiments. (entry from Genetic Analysis Software) gene, genetic, genomic, r is listed by: Genetic Analysis Software nlx_154598 https://cran.r-project.org/web/packages/qtlDesign/index.html SCR_013424 2026-09-12 01:02:49 9
R package: psy
 
Resource Report
Resource Website
1+ mentions
R package: psy (RRID:SCR_015660) software resource, software toolkit Software package implementing various statistical procedures used in psychometry. r, r package, psychometry, statistical analysis is listed by: CRAN Free, Available for download, Runs on Windows, Runs on Mac OS SCR_015660 Package ‘psy’, psy: Various procedures used in psychometry, psy 2026-09-12 01:02:52 1
topGO
 
Resource Report
Resource Website
1000+ mentions
topGO (RRID:SCR_014798) software resource, software toolkit Software package which provides tools for testing GO terms while accounting for the topology of the GO graph. Different test statistics and different methods for eliminating local similarities and dependencies between GO terms can be implemented and applied. r, go, go graph, local similarities, software tool, software package, bio.tools is listed by: bio.tools
is listed by: Debian
is listed by: SoftCite
works with: Gene Ontology
is hosted by: Bioconductor
Available for download biotools:topgo https://bio.tools/topgo SCR_014798 2026-09-12 01:02:51 3080
In-Vitro-Sholl
 
Resource Report
Resource Website
In-Vitro-Sholl (RRID:SCR_025662) software resource, source code Software R analysis code for analyzing fluorescence microscopy images to determine complexity of cultured astrocytes. Sholl profile analysis based on mixed-effect models. analyzing fluorescence microscopy images, cultured astrocytes, image, R, Sholl, Sholl profile analysis, mixed-effect models, PMID:28104486 Free, Available for download, Freely available, https://github.com/adrigabzu/sholl_analysis_in_R SCR_025662 In vitro astrocyte sholl analysis in R 2026-09-12 01:04:49 0
mwtabR
 
Resource Report
Resource Website
mwtabR (RRID:SCR_014677) software resource, source code An R package that downloads and parses mwtab data from Metabolomics Workbench studies. Downloaded files are converted into R lists. statistical analysis, statistical analysis package, r, r package, metabolomics, parse is listed by: Metabolomics Workbench SCR_014677 R Package for downloading and parsing mwTab files from the Metabolomics Workbench 2026-09-12 01:03:47 0
ncdfFlow
 
Resource Report
Resource Website
ncdfFlow (RRID:SCR_000009) software resource Software package that provides netCDF storage based methods and functions for manipulation of flow cytometry data. software package, mac os x, unix/linux, windows, r, flow cytometry is listed by: OMICtools
has parent organization: Bioconductor
Free, Available for download, Freely available OMICS_05617 SCR_000009 ncdfFlow: A package that provides ncdf based storage for flow cytometry data 2026-09-12 01:06:03 0
R package: nlme
 
Resource Report
Resource Website
50+ mentions
R package: nlme (RRID:SCR_015655) software resource, source code Software to fit and compare Gaussian linear and nonlinear mixed-effects models. gaussian, mixed-effects model, r, r package is listed by: CRAN Free, Available for download https://cran.r-project.org/package=nlme SCR_015655 2026-09-12 01:03:58 62

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