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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Roadmap Resource Report Resource Website 10+ mentions |
Roadmap (RRID:SCR_017207) | software application, software resource | Software tool to display surface of macromolecule and its properties. Uses projections to map van der Waals or solvent accessible surface of macromolecule onto plane., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | Display, surface, macromolecule, property, projection, van der Waal | is related to: Purdue University; West Lafayette; Indiana | Medical Research Council ; NIH ; NSF |
PMID:8384042 | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_017207 | 2026-09-05 06:33:02 | 14 | ||||||||
|
Conservation Resource Report Resource Website 1000+ mentions |
Conservation (RRID:SCR_016064) | software application, software resource, software toolkit | Software for scoring protein sequence conservation using the Jensen-Shannon divergence. It can be used to predict catalytic sites and residues near bound ligands. | scoring, protein, sequence, conservation, Jensen-Shannon, divergence, predict, catalytic, site, bound, ligands, clustal, fasta, concave | is related to: Princeton University; New Jersey; USA | NIGMS GM076275; NIH P50 GM071508; NIH T32 HG003284; NSF IIS-0612231; NSF PECASE MCB-0093399 |
PMID:17519246 | Free, Available for download | SCR_016064 | Conservation-code | 2026-09-05 06:33:01 | 1606 | |||||||
|
Mash Resource Report Resource Website 50+ mentions |
Mash (RRID:SCR_019135) | data analytics software, software application, software resource | Software tool for genome and metagenome distance estimation using MinHash. Reduces large sequences and sequence sets to small, representative sketches, from which global mutation distances can be rapidly estimated. | Genome distance estimation, metagenome distance estimation, MinHash, mutation distance, sequence, sequence set |
is listed by: Debian is listed by: OMICtools |
NHGRI ; NIH |
PMID:27323842 | Free, Available for download, Freely available | OMICS_10468 | https://mash.readthedocs.io/en/latest/, https://sources.debian.org/src/mash/ | SCR_019135 | 2026-09-05 06:33:05 | 75 | ||||||
|
Calculator for Association with Two Stage design Resource Report Resource Website 100+ mentions |
Calculator for Association with Two Stage design (RRID:SCR_007238) | CaTS | software application, software resource | Software tool for carrying out power calculations for large genetic association studies, including two stage genome wide association studies. | Calculator, genetic association, genetic association studies, two stage genome wide association studies, | has parent organization: University of Michigan; Ann Arbor; USA | NIH | Free, Freely available | nlx_154258, SCR_009139, nif-0000-30278 | SCR_007238 | CATS, power Calculator for Association with Two Stage design | 2026-09-05 06:32:38 | 310 | ||||||
|
KI Biobank - HARMONY Resource Report Resource Website 1+ mentions |
KI Biobank - HARMONY (RRID:SCR_008884) | HARMONY | biomaterial supply resource, material resource | A twin study characterizing the importance of genetic factors for dementia and using discordant twin pairs to study other putative risk factors which control for genetic propensity to develop the disease. Molecular genetic studies have identified a number of mutations and other markers associated with early age of onset Alzheimer''''s disease. However, most cases of late age of onset dementia are considered sporadic, that is, without a clear genetic basis. Twin studies provide a unique opportunity to characterize the importance of genetic factors for dementia. Discordant twin pairs additionally provide the opportunity to study other putative risk factors which controlling for genetic propensity to develop the disease. In the first wave of the Study of Dementia in Swedish Twins, all SATSA twins born before 1935 have been screened for dementia symptoms. Over 190 suspects have been identified. This pilot study has been expanded to the entire registry in the study known as HARMONY. All twins aged 65 and older were invited to participate in a computer assisted telephone screening interview. A total of 13,519 individuals completed the interview (response rate = 75.9%). Dementia screening was based on the TELE, which includes the 10-item MSQ, other cognitive items (counting backwards, recalling three words, and similarities), and questions about health and daily functioning; or on Blessed scores obtained from a proxy interview. Among those screened, 1565 were positive for suspicion of dementia and were referred for complete clinical evaluation by a physician and a nurse. Once the preliminary in-person evaluation suggested that the suspected case was demented, the twin partner was also invited for an identical clinical work-up. Response rate for clinical evaluations is 71.4%. Approximately half of those visited for evaluation have been diagnosed as demented according to DSM-IV criteria, of which two-thirds have Alzheimer''''s disease. An extensive assessment of probable risk exposure is also included. Longitudinal follow-up is yet another feature of the study. Association studies with candidate genes are also being performed. Types of samples * DNA Number of sample donors * 1154 (sample collection completed) | interview, late adult human, clinical evaluation, association study, candidate gene, gene, risk factor, twin, longitudinal |
is listed by: One Mind Biospecimen Bank Listing is related to: Swedish Twin Registry is related to: KI Biobank - SATSA has parent organization: Karolisnka Biobank |
Dementia, Alzheimer''''s disease, Discordant twin, Aging | NIH | nlx_151298 | http://ki.se/en/meb/dementia-in-swedish-twins-harmony | SCR_008884 | Dementia in Swedish Twins (HARMONY) | 2026-09-05 06:32:41 | 2 | |||||
|
Emory University Robert P. Apkarian Integrated Electron Microscopy Core Facility Resource Report Resource Website 10+ mentions |
Emory University Robert P. Apkarian Integrated Electron Microscopy Core Facility (RRID:SCR_023537) | IEMC | access service resource, core facility, service resource | Core helps investigators use the latest technologies on structural research in their projects. Provides expertise in experimental needs. | USEDit, ABRF, electron microscopy, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Emory University; Georgia; USA |
Emory University School of Medicine ; Georgia Clinical and Translational Science Alliance ; NIH ; NSF |
ABRF_1753 | https://coremarketplace.org/?FacilityID=1753&citation=1 | SCR_023537 | Robert P. Apkarian Integrated Electron Microscopy Core (IEMC), Emory University Robert P. Apkarian Integrated Electron Microscopy Core (IEMC) | 2026-09-05 06:34:35 | 31 | ||||||
|
National High Magnetic Field Laboratory Ion Cyclotron Resonance Core Facility Resource Report Resource Website 1+ mentions |
National High Magnetic Field Laboratory Ion Cyclotron Resonance Core Facility (RRID:SCR_017361) | ICR, FT-ICR | access service resource, core facility, service resource | Facility provides service operations for sample analysis that requires ultrahigh resolution and high mass accuracy of Fourier Transform Ion Cyclotron Resonance. Used for research in biomolecular analysis, hydrogen-deuterium exchange and environmental and petrochemical analysis. Four FT-ICR mass spectrometers feature high magnetic fields including the world-record 21 tesla and are compatible with multiple ionization and fragmentation techniques. | FT-ICR, ICR, Ion Cyclotron Resonance, Fourier Transform Ion Cyclotron Resonance, analysis, spectrometer, magnetic, field, tesla, ionization, fragmentation, technique | is related to: Florida State University; Florida; USA | Department of Defense ; Department of Energy ; Florida State ; NIH ; NSF |
Restricted | SCR_017361 | National High Magnetic Field Laboratory Ion Cyclotron Resonance Facility, Ion Cyclotron Resonance Facility, NHMF Laboratory Cyclotron Resonance Facility | 2026-09-05 06:34:10 | 1 | |||||||
|
Nebraska University Medical Center Flow Cytometry Research Core Facility Resource Report Resource Website 1+ mentions |
Nebraska University Medical Center Flow Cytometry Research Core Facility (RRID:SCR_017736) | access service resource, core facility, service resource | Provides central location for flow cytometry instrumentation and education. Services include Flow Cytometry,Cell sorting, data analysis, training. Software packages to analyze data include ModFit LT, BD FACSDiva v6, Cell Quest Pro, and FlowJo vX, from facility workstations. | Flow, cytometry, cell, sorting, data, analysis, training, service, core | Fred and Pamela Buffett Cancer Center's National Cancer Institute Cancer Support Grant ; Nebraska Banker Fund ; Nebraska Research Initiative ; NIH NCRR Shared Instrument Program; Office of the Vice Chancellor for Research ; University of Nebraska Foundation |
Open | ABRF_203 | SCR_017736 | 2026-09-05 06:34:11 | 4 | |||||||||
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Columbia University Quantitative Proteomics and Metabolomics Core Facility Resource Report Resource Website |
Columbia University Quantitative Proteomics and Metabolomics Core Facility (RRID:SCR_017747) | access service resource, core facility, service resource | Core provides identification of proteins and metabolites with differential quantitative expression in cells, tissues or in protein affinity purifications. Particular emphasis is on quantitative analysis of posttranslational modifications such as phosphorylation. | Identification, protein, metabolite, quantitative, expression, cell, tissue, protein, affinity, purification, analysis, phosphorylation, service, core | Columbia University ; Department of Defense ; New York State Stem Cell Science Board (NYSTEM) ; NIH ; NSF |
Open | ABRF_248 | SCR_017747 | Quantitative Proteomics and Metabolomics Center | 2026-09-05 06:34:11 | 0 | ||||||||
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National High Magnetic Field Laboratory Electron Magnetic Resonance Core Facility Resource Report Resource Website 1+ mentions |
National High Magnetic Field Laboratory Electron Magnetic Resonance Core Facility (RRID:SCR_017359) | EMR | access service resource, core facility, service resource | EMR Facility offers home-built, high-frequency and high-field continuous-wave instruments providing frequency coverage from 9 GHz to 1 THz, with additional frequencies available up to 2.5 THz using molecular gas laser. EMR covers variety of magnetic resonance techniques associated with electron like Electron Paramagnetic/Spin Resonance (EPR/ESR). EPR/ESR can be performed on any sample that has unpaired electron spins and used in applications in physics, materials science, chemistry and biology, including studies of impurity states, molecular clusters, antiferromagnetic, ferromagnetic and thin film compounds, natural or induced radicals, optically excited paramagnetic states, electron spin-based quantum information devices, transition-metal based catalysts; and for structural and dynamical studies of metallo-proteins, spin-labeled proteins and other complex bio-molecules and their synthetic models. | Magnet, EMR, Electron Magnetic Resonance, Tallahassee Florida Headquarters, spin, resonance, unpaired, electron, spectrometer | is related to: Florida State University; Florida; USA | Department of Defense ; Department of Energy ; Florida State ; NIH ; NSF |
Restricted | https://nationalmaglab.org/user-facilities/emr, https://nationalmaglab.org/images/users/emr/searchable_docs/epr_news_vol2_n2.pdf | https://nationalmaglab.org/user-facilities/emr/instruments-emr | SCR_017359 | NHMFL EMR facility, EMR Instruments, Electron Magnetic Resonance Facility | 2026-09-05 06:34:10 | 1 | |||||
|
National High Magnetic Field Lab DC Field Core Facility Resource Report Resource Website |
National High Magnetic Field Lab DC Field Core Facility (RRID:SCR_017358) | NHMFL DC Field Laboratory | access service resource, core facility, service resource | Facility located at MagLab headquarters near Florida State University in Tallahassee. Contains 14 resistive magnet cells connected to 56 megawatt DC power supply and 15,000 square feet of cooling equipment to remove heat generated by magnets. Includes several superconducting magnets operating at millikelvin temperatures. Among these instruments is 45-tesla hybrid magnet, which offers scientists strongest continuous magnetic field in world. Research is supported by magnet plant and cryogenic system operators. Technicians design, build and repair instruments for user research. | Magnet, NHMFL, magnetic, field, plant, cryogenic, | is related to: Florida State University; Florida; USA | Department of Defense ; Department of Energy ; Florida State ; NIH ; NSF |
Restricted | SCR_017358 | DC Field Facility, NHMF Lab Facility | 2026-09-05 06:34:10 | 0 | |||||||
|
Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility Resource Report Resource Website 100+ mentions |
Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility (RRID:SCR_017801) | access service resource, core facility, service resource | Core mass spec and proteomic services include open access lab for trained users with GC/MS, LC/MS, high resolution LC/MS, and MALDI-TOF instruments, help with intact protein analysis, targeted quantitation, drug discovery support, pathway analysis, protein interactions, FFPE tissue analysis, both labeled and label-free proteomics, and more. Please contact SUMS to discuss these and other custom projects including new application development. | Mass, spectrometry, proteomics, training, analysis, targeted, quantitation, drug, discovery, pathway, protein, interaction, service, USEDit, ABRF |
uses: Waters: SQD2 LC/MS system uses: Waters: Select Series Cyclic IMS uses: Thermo Fisher: Exactive Orbitrap LC/MS system uses: Thermo Fisher: LTQ XL LC/MS system uses: Thermo Fisher: Orbitrap Fusion nanoLC/MS system uses: Thermo Fisher: QE-HFX mass spectrometer uses: Thermo Fisher: Vantage LC/MS mass spectrometer uses: Stanford Sciex 7500+ Triple Quadrupole LC/MS system uses: Waters: Quattro Premier LC/MS system uses: Stanford Shimadzu 8030 LC/MS mass spectrometer uses: Bruker: Scion TQ GC/MS mass spectrometer uses: Bruker: micrOTOF-Q II LC/MS system uses: Agilent: 7890/5975 GC/MS system uses: Thermo Fisher: Orbitrap Eclipse nanoLC/MS system uses: Thermo Fisher: Exploris 480 nanoLC/MS system uses: Thermo Fisher: Exploris 240 LC/MS system uses: Waters: Andrew Pipetting Robot uses: Agilent: 6495 Triple Quadrupole LC/MS uses: Waters: Select Series MRT uses: Stanford Bruker timsTOF Ultra nanoLC/MS uses: Thermo Fisher: LTQ-Orbitrap Elite nano LC/MS system uses: Bruker: Microflex MALDI TOF mass spectrometer uses: Waters: Xevo TQ-XS mass spectrometer is listed by: ABRF CoreMarketplace has parent organization: Stanford University; Stanford; California |
NCI CA124435; NIH S10 OD026962; NIH S10 RR027425; Vincent and Stella Coates |
Open | ABRF_489 | https://coremarketplace.org/?FacilityID=489 | SCR_017801 | Vincent Coates Foundation Mass Spectrometry Laboratory | 2026-09-05 06:34:12 | 117 | ||||||
|
New York University School of Medicine Langone Health Microscopy Laboratory Core Facility Resource Report Resource Website 100+ mentions |
New York University School of Medicine Langone Health Microscopy Laboratory Core Facility (RRID:SCR_017934) | access service resource, core facility, service resource | Core offers comprehensive light and electron microscopy technologies. Our scientists use light microscopes and electron microscopes at resolutions ranging from centimeters to angstroms, providing clear and detailed images.We assist at every stage of your experiment, offering research-design consultation and instrument training, as well as guidance in study execution, analysis, and presentation for publication. | Microscopy, light, electron, image, training, experiment, consultation, analysis, service, core, ABRF, USEDit |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: New York University School of Medicine; New York; USA |
NCI CA016087; NCRR RR023704; NCRR RR024708; NIH Office of the Director OD019974; NIH A1080192 |
Open | ABRF_366 | https://coremarketplace.org/?FacilityID=366 | SCR_017934 | NYU Langone Microscopy Laboratory | 2026-09-05 06:34:15 | 142 | ||||||
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PharmKGB Resource Report Resource Website 100+ mentions |
PharmKGB (RRID:SCR_025580) | data or information resource, knowledge base | NIH-funded resource that provides information about how human genetic variation affects response to medications. PharmGKB collects, curates and disseminates knowledge about clinically actionable gene-drug associations and genotype-phenotype relationships. | human genetic variation affects, response to medications, clinically actionable gene-drug associations, genotype-phenotype relationships, | NIH | Free, Freely available, | SCR_025580 | Pharmacogenomics Knowledgebase | 2026-09-05 06:35:02 | 318 | |||||||||
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NIH PRECISION Human Pain Network Resource Report Resource Website 10+ mentions |
NIH PRECISION Human Pain Network (RRID:SCR_025458) | data or information resource, disease-related portal, portal, topical portal | Project titled Program to Reveal and Evaluate Cells-to-gene Information that Specify Intricacies, Origins, and Nature of Human Pain (PRECISION) Network to develop meaningful resource for knowledge transfer, and to integrate and share Human Pain Associated Genes and Cell Datasets. Building knowledge platform to visualize, query, and interact with these data will support researchers and help accelerate dissemination of vital data to the larger scientific community. These goals align with NIH Helping to End Addiction Long-term (HEAL) Initiative, which seeks to accelerate the discovery and successful translation of non-addictive pain therapeutics. PRECISION Human Pain Network will leverage prior interdisciplinary collaboration to create workflows, tools, and infrastructure to define data and metadata types, to improve data management and sharing, and to integrate datasets and visualization tools. | Human pain network, human pain associated genes and cell datasets, knowledge platform, HEAL, integrated data, |
is related to: SPARC Portal is related to: Harmonized DRG and TG Reference Atlas |
NIH | Free, Freely available | SCR_025458 | PRECISION Pain Network | 2026-09-05 06:35:05 | 20 | ||||||||
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University of Michigan Medical School Bioinformatics Core Resource Report Resource Website 10+ mentions |
University of Michigan Medical School Bioinformatics Core (RRID:SCR_019168) | access service resource, core facility, service resource | Core helps researchers identify and interpret patterns in RNA and DNA by placing sequencing data into biologically meaningful context. Services include experimental design, developing reproducible workflows, analyzing next-generation sequencing data, and supporting manuscript development/publication. | USEDit, identify and interpret patterns, RNA, DNA, sequencing data, analyzing NGS data, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: University of Michigan Medical School; Michigan; USA |
NIH | ABRF_522 | https://coremarketplace.org/?FacilityID=522 | SCR_019168 | Bioinformatics Core, UMMS Bioinformatics Core | 2026-09-05 06:34:18 | 24 | |||||||
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Cornell University BRC Epigenomics Core Facility Resource Report Resource Website 10+ mentions |
Cornell University BRC Epigenomics Core Facility (RRID:SCR_021287) | access service resource, core facility, service resource | Provides service that maps protein DNA interactions genome wide, tracks experimental metadata, and implements quality controlled data processing and research based analysis pipelines. Provides epigenomic and bioinformatic research resources and services that include sample preparation services and data generation. Open source platforms enable and reinforce FAIR data practices. Core is able to receive and process cell and tissue samples for various diagnostic epigenetic assays. | USEDit, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: Cornell University; New York; USA |
NIH ; NSF |
ABRF_1185 | https://coremarketplace.org/?FacilityID=1185 | SCR_021287 | CU Epigenomics Core Facility, Cornell University Epigenomics Core Facility | 2026-09-05 06:34:21 | 12 | |||||||
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BETSY Resource Report Resource Website |
BETSY (RRID:SCR_026239) | software resource, source code | Software system for performing bioinformatics analyses. System includes knowledge base where the capabilities of bioinformatics software is explicitly and formally encoded. Backwards-chaining rule-based expert system comprised of data model that can capture richness of biological data, and inference engine that reasons on knowledge base to produce workflows. Knowledge base is populated with rules to analyze microarray and next generation sequencing data. | produce workflows, performing bioinformatics analyses, microarray data analysis, next generation sequencing data analysis, | Cancer Prevention and Research Institute of Texas ; NIH |
PMID:28052928 | Free, Available for download, Freely available, | SCR_026239 | Bioinformatics ExperT SYstem | 2026-09-05 06:35:16 | 0 | ||||||||
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University of Michigan Statistics Online Computational Resource Core Facility Resource Report Resource Website |
University of Michigan Statistics Online Computational Resource Core Facility (RRID:SCR_022917) | SOCR | access service resource, core facility, service resource | SOCR designs, validates and freely disseminates knowledge. The Resource develops AI/ML tools, mathematical models, and end-to-end data analytic protocols for biomedical and health studies. It provides portable online aids for probability, statistics and health science education, promotes technology enhanced instruction, supports efficient statistical computing, supports AI-services, and advances predictive big data analytics. The SOCR platform includes repository of interactive apps, datasets and case-studies, computational tools, visualization approaches, instructional resources, learning materials, and curricular components. SOCR faculty, staff, and students support data and information science collaborations and analytic partnerships involving biomedical, healthcare, and biostatistical investigations. | ABRF, probability, statistics and health science education, statistical computing, predictive big data analytics |
is listed by: ABRF CoreMarketplace has parent organization: University of Michigan; Ann Arbor; USA |
NIH ; NSF |
ABRF_1602 | https://coremarketplace.org/?FacilityID=1602&citation=1 | SCR_022917 | Statistics Online Computational Resource (SOCR), University of Michigan Ann Arbor Statistics Online Computational Resource (SOCR) | 2026-09-05 06:34:30 | 0 | ||||||
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University of Oklahoma Biomolecular Structure Core Facility Resource Report Resource Website 1+ mentions |
University of Oklahoma Biomolecular Structure Core Facility (RRID:SCR_028074) | access service resource, core facility, service resource | Offers access to instrumentation, training and services for structure determination of macromolecular molecules using single crystal X-ray diffraction and/or cryo-EM Single Particle Analysis (SPA). Instrumentation is available for initial crystallization trials, optimization of crystallization, single crystal X-ray diffraction and data collection at synchrotron radiation facilities, as well as electron microscopy grid preparation for cryo-EM (SPA), screening and data collection using a Thermo Scientific Tundra Cryo-TEM and assistance for data collection at national laboratories. | ABRF, structure determination, macromolecular molecules, single crystal X-ray diffraction, cryo-EM Single Particle Analysis, |
is listed by: ABRF CoreMarketplace has parent organization: University of Oklahoma; Oklahoma; USA |
NIH P20GM103640; NIH P30GM145423; NSF 0922269 |
ABRF_5821 | https://coremarketplace.org/RRID:SCR_028074/?citation=1 | SCR_028074 | 2026-09-05 06:36:06 | 1 |
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