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http://www.lipidmaps.org/

Multi-institutional supported website and database that provides access to large number of globally used lipidomics resources. Internationally led the field of lipid curation, classification, and nomenclature since 2003. Produces new open-access databases, informatics tools and lipidomics-focused training activities will be generated and made publicly available for researchers studying lipids in health and disease.

Proper citation: LIPID Metabolites And Pathways Strategy (RRID:SCR_006579) Copy   

•   Source: SciCrunch Registry
  

http://thelongevityfoundation.org/

Funding resource that supports research into A-T (Ataxia Telangiectasia) and other debilitating, degenerative diseases plaguing human kind, including cancer and neuro-degeneration associated with auto-immunity and aging. Researchers share their findings and collaborate with each other. The research must lead to practical, near-term treatments and cures to receive funds. The researchers have found treatments and cures that are the first of their kind in the world. Over $850,000 in direct research grants have been made. These grants have leveraged over $9 million in research resources contributed by partner institutions. We pay the research institutions for direct costs only. We pay no administrative, indirect, or overhead costs.

Proper citation: Longevity Foundation (RRID:SCR_006338) Copy   

•   Source: SciCrunch Registry
  

http://www.ucl.ac.uk/ion

The Institute of Neurology is a specialist postgraduate institute of UCL. The Institute is closely associated in its work with the National Hospital for Neurology & Neurosurgery, University College London Hospitals'' NHS Foundation Trust, and in combination they form a national and international centre at Queen Square for teaching, training and research in neurology and allied clinical and basic neurosciences. The Institute of Neurology has eight academic departments encompassing clinical and basic research within in each theme: Neurodegenerative Disease; Molecular Neuroscience, incorporating the Reta Lila Weston Institute of Neurological Studies; Clinical and Experimental Epilepsy; Motor Neuroscience and Movement Disorders; Imaging Neuroscience; Brain Repair and Rehabilitation, Neuroinflammation and Clinical Neurosciences, Royal Free campus. In parallel there are currently six divisions representing professional affiliations: Clinical Neurology; Neurosurgery; Neurophysiology; Neuropathology; Neuropsychiatry and Neuropsychology; and Neuroradiology and Neurophysics. The Institute employs a total of around 500 staff, occupies some 6,451 sq m of laboratory and office space in five buildings, and has a current annual turnover of 33m pounds. The Institute currently holds over 250 active grants, supporting research into the causes and treatment of a wide range of neurological diseases, including movement disorders, multiple sclerosis, epilepsy, brain cancer, stroke and brain injury, muscle and nerve disorders, cognitive dysfunction and dementia, and the work of the Institute''s clinical academic staff is closely integrated with the Hospital''s care of patients. UCL Neuroscience is currently rated second in the world by ISI Essential Science Indicators, and four of the top twelve most highly cited authors working worldwide in neuroscience and behaviour are based at the IoN. There are seven Fellows of the Royal Society at Queen Square.

Proper citation: UCL Institute of Neurology (RRID:SCR_006574) Copy   

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http://lincs.hms.harvard.edu/db/

Database that contains all publicly available HMS LINCS datasets and information for each dataset about experimental reagents and experimental and data analysis protocols. Experimental reagents include small molecule perturbagens, cells, antibodies, and proteins.

Proper citation: HMS LINCS Database (RRID:SCR_006454) Copy   

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http://www.cochrane.org/editorial-and-publishing-policy-resource/cochrane-central-register-controlled-trials-central

A bibliographic database that provides a highly concentrated source of reports of randomized controlled trials. Records contain the list of authors, the title of the article, the source, volume, issue, page numbers, and, in many cases, a summary of the article (abstract). They do not contain the full text of the article. Cochrane Groups maintain and update Specialized Registers, which are collections of controlled trials relevant to the groups. CENTRAL is comprised of these Specialized Registers, relevant records retrieved from MEDLINE and EMBASE, and records retrieved through handsearching (planned manual searching of a journal or conference proceedings to identify all reports of randomized controlled trials and controlled clinical trials). The Cochrane Collaboration contracts a technology company, Metaxis, to merge the records from the sources outlined above and provide a data feed to the publisher. New and changed data are delivered to the publisher on a monthly basis.

Proper citation: Cochrane Central Register of Controlled Trials (RRID:SCR_006576) Copy   

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http://cdmrp.army.mil/

Fund the best research to eradicate diseases and support the warfighter to benefit the American Public. They promote innovative research, recognizing untapped opportunities, creating partnerships, and guarding the public trust. Research Program topics include: * Amyotrophic Lateral Sclerosis * Autism * Bone Marrow Failure * Breast Cancer * Defense Medical Research and Development Program * Duchenne Muscular Dystrophy * Gulf War Illness * Lung Cancer * Multiple Sclerosis * Neurofibromatosis * Ovarian Cancer * Peer Reviewed Cancer * Peer Reviewed Medical * Peer Reviewed Orthopaedic * Prostate Cancer * Psychological Health / Traumatic Brain Injury * Spinal Cord Injury * Tuberous Sclerosis Complex

Proper citation: Congressionally Directed Medical Research Program (RRID:SCR_006456) Copy   

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http://bioinformatics.ubc.ca/ermineJ/

Data analysis software for gene sets in expression microarray data or other genome-wide data that results in rankings of genes. A typical goal is to determine whether particular biological pathways are doing something interesting in the data. The software is designed to be used by biologists with little or no informatics background. A command-line interface is available for users who wish to script the use of ermineJ. Major features include: * Implementation of multiple methods for gene set analysis: ** Over-representation analysis ** A resampling-based method that uses gene scores ** A rank-based method that uses gene scores ** A resampling-based method that uses correlation between gene expression profiles (a type of cluster-enrichment analysis). * Gene sets receive statistical scores (p-values), and multiple test correction is supported. * Support of the Gene Ontology terminology; users can choose which aspects to analyze. * User files use simple text formats. * Users can modify gene sets or create new ones. * The results can be visualized within the software. * It is simple to compare multiple analyses of the same data set with different settings. * User-definable hyperlinks are provided to external sites to allow more efficient browsing of the results. * For programmers, there is a command line interface as well as a simple application programming interface that can be used to plug ermineJ functionality into your own code Platform: Online tool, Windows compatible, Mac OS X compatible, Linux compatible, Unix compatible

Proper citation: ErmineJ (RRID:SCR_006450) Copy   

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http://w3.cns.org/university/videos/index2.asp

The Congress of Neurological Surgeons presents surgical videos on a variety of topics: Cerebrovascular, Pain, Pediatric, Peripheral Nerves, Spine, Functional/Epilepsy, and Tumor. You must have QuickTime player installed to view the videos but you can download this from the site. Cerebrovascular * Contralateral Microsurgical Approach to Multiple Aneurysms * Microsurgical Exosure and Clipping of an Ophthalmic Clinoidal Aneurysm Pain * Motor Cortex Stimulation for Chronic Pain * Pain Surgery * Spinal Cord Stimulation for Failed Back Syndrome * Treatment of Chiari I Malformation Pediatric * Occipitocervical Fusion in a Pediatric Patient:Use of a New Device Peripheral Nerves * Brachial Plexus Schwannoma in the Upper Trunk * Mini Open Carpal Tunnel Release * Ulnar Nerve Neurolysis and Subcutaneous/Submuscular Transposition Spine * Bilateral Thoracoscopic Sympathectomy * En Bloc Resection of Primary Cervical Spine Tumors * Endoscopic Thoracic Stabilization * Occipitocervical Fusion in a Pediatric Patient:Use of a New Device * Spinal Cord Stimulation for Failed Back Syndrome * Surgical Management of Spinal Cord Ependymomas * Thoracoscopic Discectomy * Treatment of Chiari I Malformation Functional/Epilepsy * Anteromedial Temporal Resection * STN Deep Brain Stimulation for Parkinson''s Disease Tumor * En Bloc Resection of Primary Cervical Spine Tumors * Insular Tumor Resection * Surgical Management of Spinal Cord Ependymomas * Surgical Resection of Brain Metastasis

Proper citation: University of Neurosurgery Video Theatre (RRID:SCR_006330) Copy   

•   Source: SciCrunch Registry
  

http://www.nist.gov/srd/

For over 40 years, NIST has provided well-documented numeric data to scientists and engineers for use in technical problem-solving, research, and development. These recommended values are based on data which have been extracted from the world''s literature, assessed for reliability, and then evaluated to select the preferred values. These data activities are conducted by scientists at NIST. NIST Data Gateway-provides easy access to many (currently over 80) of the NIST scientific and technical databases. These databases cover a broad range of substances and properties from many different scientific disciplines. The Gateway includes links to free online NIST data systems as well as to information on NIST PC databases available for purchase.

Proper citation: NIST Standard Reference Data (RRID:SCR_006452) Copy   

•   Source: SciCrunch Registry
  

http://embryoimaging.org/

Collection of high resolution images and movies of mouse and human embryos produced using high resolution episcopic microscopy (HREM). Each data set is a series of block-face images generated during sectioning through an entire embryo, typically cut at 2-3 micrometers. Datasets are organized by approximate developmental stage and each embryo has been assigned a specimen ID (SID) for identification. This is an ongoing project funded by the Wellcome Trust to provide comprehensive imaging of normal and mutant mouse embryos that will complement the standard anatomical texts and form the basis for systematic phenotyping. * Movies: A 3D reconstruction shows each embryo, and lower resolution movies created through each orthogonal plane enable you to quickly review the data set. * Image Stacks: In the stack viewer, you can step through the images in sequence, zoom in to see fine details and adjust the image contrast. * NEW: Embryo Comparison: Two image stacks can now be compared in the stack viewer.

Proper citation: Embryo Imaging (RRID:SCR_006329) Copy   

•   Source: SciCrunch Registry
  

http://www.neuro-cloud.net/

Neuroscience-related portal that has launched a free textbook project on a wiki that will provide a free, accurate and comprehensive introduction to neuroscience for both educators and students. This is being accomplished through an online collaborative environment where the next generation of neuroscientists - and anyone who would like to help - will have the opportunity to work with colleagues from all over the world. The textbook is provided in three different formats: A downloadable app from the IOS and android market, a downloadable .pdf, and a physical copy that can be ordered at cost. Articles and a blog are also available from the portal.

Proper citation: Neuro-Cloud (RRID:SCR_006365) Copy   

•   Source: SciCrunch Registry
  

http://repositories.cdlib.org/mrrc/1

This is a data resource of recordings of spike activity from about 5000 neurons along the auditory pathway from the cochlear nuclei to the neocortex, cerebellum, and elsewhere. There is also an analysis program that averages histograms of spike activity and concurrent electromyographic (EMG) activity obtained from the orbicularis oculi (eyeblink) and levator oris (nose twitch) muscles. No search interface; distribution consists of a collection of Microsoft Office and Windows executable files. Each recording contains the response to a 70 dB click* (produced by applying a 1 ms rectangular pulse to a loudspeaker) before or after conditioning blink responses to the click as a CS. A discriminative acoustic stimulus, a 70 dB hiss DS, was also presented at a time apart from the click. There are guides to the regions from which each recording was made and to the associated behavioral states as well as a tutorial on how to use the analysis program. There is an appendix listing the data format. Sufficient indexes and examples are available here to understand the data. The data can be downloaded (voluminous) or borrowed on CD (5) from the UCLA Biomedical Library and copied. There is also an analysis program that averages histograms of spike activity and concurrent electromyographic (EMG) activity obtained from the orbicularis oculi (eyeblink) and levator oris (nose twitch) muscles. Each recording contains the response to a 70 dB click (produced by applying a 1 ms rectangular pulse to a loudspeaker) before or after conditioning blink responses to the click as a CS. A discriminative acoustic stimulus, a 70 dB hiss DS, was also presented at a time apart from the click. There are guides to the regions from which each recording was made and to the associated behavioral states as well as a tutorial on how to use the analysis program. There is an appendix listing the data format. There is a second appendix (12. Appendix 2) with downloadable, self-executable data files of the complete database. Also available are copies of the original lab notebooks with depths of the recordings. WHAT THE ANALYSIS PROGRAM DOES 1. Averages four groups of specified spike or EMG files. 2. Graphs the current averages as peri-stimulus time histograms (PSTHs). (Check the ppt files.) 3. Adjusts scaling to specification. 4. Prints or copies the graphs to slides. 5. Creates super averages from specified averages or data from many units 6. Graphs, scales, prints and copies super averages 7. Batch processing as yet not ready for use 8. Provides detailed reports of all useful information contained within the current averages raw data files or general information about the super averages 9. Provides error messages concerning the analyses.

Proper citation: Summary of recordings of spike trains available for analysis and guide to their context and means for their analysis (RRID:SCR_006366) Copy   

•   Source: SciCrunch Registry
  

https://www.proteinmods.com/

An Antibody supplier

Proper citation: Protein Mods (RRID:SCR_006488) Copy   

•   Source: SciCrunch Registry
  

http://www.conceptwiki.org

A community owned repository of concepts used to define all concepts unambiguously. Users can edit and add their own concepts to the wiki.

Proper citation: ConceptWiki (RRID:SCR_006362) Copy   

•   Source: SciCrunch Registry
  

http://colt.ccbr.utoronto.ca/cancer/

The COLT-Cancer database is a collection of shRNA dropout signatures profiles, covering ~16000 human genes, and derived from more than 70 Pancreatic, Ovarian and Breast human cancer cell-lines using the microarray detection platform developed in the COLT (CCBR-OICR Lentiviral Technology) facility at the Moffat Lab. All shRNA dropout profiles are freely available through download or queries via this website.

Proper citation: COLT-Cancer (RRID:SCR_006485) Copy   

•   Source: SciCrunch Registry
  

http://www.mousebook.org/

Databases and portal to data and ordering mouse strains from MRC Harwell including mouse stocks in FESA (Frozen Embryo and Sperm Archive), mutants from the mutagenesis screen, the ENU DNA archive, standardized phenotyping procedures, imprinting genes and chromosome anomalies. The portal integrates curated information from the MRC Harwell stock resource, and other Harwell databases, with information from external data resources to provide added value information above and beyond what is available through other routes such as IMSR (International Mouse Stain Resource). MouseBook can be searched either using an intuitive Google-style free text search or using the Mammalian Phenotype Ontology (MP) tree structure. Text searches can be on gene, allele, strain identifier (e.g. MGI ID) or phenotype term and are assisted by automatic recognition of term types and autocompletion of gene and allele names covered by the database. Results are returned in a tabbed format providing categorized results identified from each of the catalogs in MouseBook. Individual results lines from each catalog include information on gene, allele, chromosomal location and phenotype and provide a simple click-through link to further information as well as ordering the strain. The infrastructure underlying MouseBook has been designed to be extensible, allowing additional data sources to be added enabling other sites to make their data directly available through MouseBook.

Proper citation: MouseBook (RRID:SCR_006358) Copy   

•   Source: SciCrunch Registry
  

http://www.aspet.org/

Scientific society whose members conduct basic and clinical pharmacological research in academia, industry and the government developing disease-fighting medicines and therapeutic agents. ASPET publishes five journals: Drug Metabolism and Disposition, Journal of Pharmacology and Experimental Therapeutics, Molecular Pharmacology, Pharmacological Reviews, and Molecular Interventions. ASPET''s membership newsletter is The Pharmacologist. ASPET''s annual meeting is part of Experimental Biology. There are numerous career opportunities in the field of pharmacology available to graduates of advanced training programs. The Society''s web site lists university departments of pharmacology that have established Web sites describing their graduate study programs but it is unlikely that their listing will be complete. ASPET supports nine Divisions, each of which is governed by an Executive Committee. * Division for Behavioral Pharmacology * Division for Cardiovascular Pharmacology * Division for Drug Discovery and Development * Division for Drug Metabolism * Division for Integrative Systems, Translational and Clinical Pharmacology * Division for Molecular Pharmacology * Division for Neuropharmacology * Division for Pharmacology Education * Division for Toxicology

Proper citation: ASPET (RRID:SCR_006476) Copy   

•   Source: SciCrunch Registry
  

http://www.batb.org.uk/

The BATB is open to individuals who are involved or interested in Tissue Banking, research, clinical or donor-related activities. Corporate membership is available for organizations that supply technology/services to tissue banks (or have an interest in the use of human tissue for research, bio-engineering or other medical purposes). The Association is instituted for the advancement of tissue banking: * to contribute to the preparation and maintenance of professional standards for the practice of tissue banking in the United Kingdom * to facilitate the interchange of information between members * to provide opportunities for the discussion of all aspects of tissue banking practice * to encourage relevant research and development: to provide informed comment to external agencies * to foster education and training in tissue banking: to maintain national and international links with relevant bodies * to make knowledge in the field of tissue banking available to any person for the general good of the community

Proper citation: British Association for Tissue Banking (RRID:SCR_006477) Copy   

•   Source: SciCrunch Registry
  

http://www.psp.org

CurePSP+ is an organization dedicated to increasing awareness of progressive supranuclear palsy, corticobasal degeneration, and related disorders, advancing research toward a cure, educating health professionals, and providing support, education and hope for persons with PSP, CBD and their families. PSP provides a number of resources, including a research grants/funding program, support for patients and families, educational materials, and PSP-related events. Patient and family support services include an online magazine, a resources guide, an educational center that provides The Guide for Persons with PSP, videos, support group meetings, and outreach and education brochures and conferences. In addition, CurePSP offers ART2CURE, a program of CurePSP (The Society for Progressive Supranuclear Palsy) that helps to generate essential revenue for research, advocacy, outreach, education and operating through the promotion and sale of artwork provided by various artists throughout the country. CurePSP is located in Hunt Valley, Maryland. :NIF thanks the : :Parkinson''s Disease Foundation : : :for their referral of this resource to us.

Proper citation: Cure PSP: Society for Progressive Supranuclear Palsy (RRID:SCR_006478) Copy   

•   Source: SciCrunch Registry
  

http://www.jobs.nih.gov/

A listing of all current openings across the NIH. You may search for NIH Jobs, browse job descriptions, view all descriptions or use the quick links.

Proper citation: Jobs(at)NIH (RRID:SCR_006471) Copy   

•   Source: SciCrunch Registry