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Species: Homo sapiens
Genetic Insert: SREBP1
Vector Backbone Description: Vector Backbone:pcDNA3.1; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39580542
Proper citation: RRID:Addgene_228401 Copy
Species: Homo sapiens
Genetic Insert: mT2Del_EPACdDEPCD_Q270E_E325T_L777A_K778A_tdcp173Venus(ST)
Vector Backbone Description: Backbone Size:5500; Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39737677
Comments: This sensor is not included in the published article, but it is available on our lab’s website for the scientific community.
https://jalinklab.nl Please visit https://doi.org/10.1101/2024.09.30.615785 for bioRxiv preprint.
Proper citation: RRID:Addgene_228249 Copy
Species: Mus musculus
Genetic Insert: sg_Gemin2_i5
Vector Backbone Description: Vector Backbone:sgTR657_ipUSEPR; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38697111
Proper citation: RRID:Addgene_228920 Copy
Species: Homo sapiens
Genetic Insert: MET without 5'UTR
Vector Backbone Description: Backbone Marker:Addgene_169280; Vector Backbone:pLenti_IRES_GFP; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39774381
Proper citation: RRID:Addgene_216536 Copy
Genetic Insert: pegRNA MET 5'UTR uORF2 mutation
Vector Backbone Description: Vector Backbone:pU6; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39774381
Proper citation: RRID:Addgene_216538 Copy
Species: Homo sapiens
Genetic Insert: Thrombopoietin receptor (26-635)
Vector Backbone Description: Backbone Marker:EMD Biosciences; Vector Backbone:pSEMS(26m); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38987559
Proper citation: RRID:Addgene_222945 Copy
Species: Saccharomyces cerevisiae
Genetic Insert: LifeAct
Vector Backbone Description: Backbone Marker:EMD Biosciences; Vector Backbone:pSEMS(26m); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38987559
Comments: StayGold from Addgene #185823
Hirano M, Ando R, Shimozono S, Sugiyama M, Takeda N, Kurokawa H, Deguchi R, Endo K, Haga K, Takai-Todaka R, Inaura S, Matsumura Y, Hama H, Okada Y, Fujiwara T, Morimoto T, Katayama K, Miyawaki A. A highly photostable and bright green fluorescent protein. Nat Biotechnol. 2022 Jul;40(7):1132-1142. doi: 10.1038/s41587-022-01278-2. Epub 2022 Apr 25. Erratum in: Nat Biotechnol. 2022 Sep;40(9):1412. doi: 10.1038/s41587-022-01469-x. PMID: 35468954; PMCID: PMC9287174.
Proper citation: RRID:Addgene_222947 Copy
Species: Mus musculus
Genetic Insert: Cdkn1a
Vector Backbone Description: Vector Backbone:pCAGIG; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38697111
Proper citation: RRID:Addgene_228912 Copy
Species: Arabidopsis thaliana
Genetic Insert: Cas9
Vector Backbone Description: Vector Backbone:pHEE401E; Vector Types:CRISPR; Bacterial Resistance:Kanamycin
Defining Citation: PMID:39645605
Proper citation: RRID:Addgene_194874 Copy
Species: Homo sapiens
Genetic Insert: MET 5'UTR
Vector Backbone Description: Backbone Marker:Promega; Vector Backbone:pGL4; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39774381
Proper citation: RRID:Addgene_226458 Copy
Species: Homo sapiens
Genetic Insert: PHOSPHO2
Vector Backbone Description: Backbone Marker:Chiaki Murakami; Backbone Size:4871; Vector Backbone:pCAGGS-N-TEV-Twin-Strep; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Comments: The insert can be removed using the restriction enzyme, XhoI.
Proper citation: RRID:Addgene_222016 Copy
Species: Homo sapiens
Genetic Insert: PHOSPHO1
Vector Backbone Description: Backbone Marker:Chiaki Murakami; Backbone Size:4871; Vector Backbone:pCAGGS-N-TEV-Twin-Strep; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Comments: The insert can be removed using the restriction enzyme, XhoI.
Proper citation: RRID:Addgene_222015 Copy
Species: Mus musculus
Genetic Insert: sg_Atm_i5
Vector Backbone Description: Vector Backbone:sgTR657_ipUSEPR; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38697111
Proper citation: RRID:Addgene_228918 Copy
Species: Homo sapiens
Genetic Insert: Unkempt Zinc Fingers 4-6
Vector Backbone Description: Backbone Size:5084; Vector Backbone:pGEX-6P-1; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39333159
Comments: Please visit https://doi.org/10.1101/2024.01.29.577729 for bioRxiv preprint.
Proper citation: RRID:Addgene_219665 Copy
Species: Other
Genetic Insert: anti-mers-nanobody-vhh-1
Vector Backbone Description: Backbone Size:5235; Vector Backbone:pET29; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:39786915
Proper citation: RRID:Addgene_206890 Copy
Species: Severe acute respiratory syndrome coronavirus 2
Genetic Insert: SARS-CoV-2 Spike Y453F
Vector Backbone Description: Backbone Marker:Twist; Vector Backbone:pTwist-CMV-BetaGlobin-WPRE-Neo; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38496628
Comments: Please visit https://www.medrxiv.org/content/10.1101/2024.03.05.24303815v1 for medRxiv preprint.
Proper citation: RRID:Addgene_212369 Copy
Species: Severe acute respiratory syndrome coronavirus 2
Genetic Insert: SARS-CoV-2 Spike XBB.1
Vector Backbone Description: Backbone Marker:Twist; Vector Backbone:pTwist-CMV-BetaGlobin-WPRE-Neo; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38496628
Comments: Relevant mutations: T19I , deltaL24P25P26 , A27S , V83A , G142D , deltaY144 , H146Q , E180V , Q183E , V213E , G252V , G339H , R346T , L368I , S371F , S373P , S375F , T376A , D405N , R408S , K417N , N440K , V445P , G446S , N460K , S477N , T478R , E484A , F486P , F490S , Q498R , N501Y , Y505H , D614G , H655Y , N679K , P681H , N764K , D796Y , Q954H , N969K Please visit https://www.medrxiv.org/content/10.1101/2024.03.05.24303815v1 for medRxiv preprint.
Proper citation: RRID:Addgene_212522 Copy
Species: Lama glama
Genetic Insert: LaG94-5
Vector Backbone Description: Backbone Marker:Novagen; Backbone Size:5443; Vector Backbone:pET21a(+); Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39098531
Proper citation: RRID:Addgene_228965 Copy
Species: Severe acute respiratory syndrome coronavirus 2
Genetic Insert: SARS-CoV-2 Spike V1104L
Vector Backbone Description: Backbone Marker:Twist; Vector Backbone:pTwist-CMV-BetaGlobin-WPRE-Neo; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38496628
Proper citation: RRID:Addgene_223274 Copy
Species: Lama glama
Genetic Insert: LaG94-9
Vector Backbone Description: Backbone Marker:Novagen; Backbone Size:5443; Vector Backbone:pET21a(+); Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39098531
Proper citation: RRID:Addgene_228968 Copy
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