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Plasmid Name Proper Citation Insert Name Organism Bacterial Resistance Defining Citation Comments Vector Backbone Description Relevant Mutation Record Last Update Mentions Count
pHRSV_CHARMS-3xA
 
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RRID:Addgene_233926 CHARMS-3xA Synthetic Ampicillin PMID:40273247 Created by Gibson assembly using MluI (5') and NotI (3') sites. Please visit https://doi.org/10.1101/2024.05.08.593169 for bioRxiv preprint. Vector Backbone:pHR-dSV40; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin 2026-09-12 02:43:31 0
pCDS.AEBP2.I3
 
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RRID:Addgene_234573 AEBP2 [Isoform 3] Homo sapiens Chloramphenicol PMID:39814169 Vector Backbone:pYTK001; Vector Types:Unspecified; Bacterial Resistance:Chloramphenicol 2026-09-12 02:43:31 0
pHRSV_CHARMS-DHF
 
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RRID:Addgene_233922 CHARMS-DHF Synthetic Ampicillin PMID:40273247 Contains the Designed Helical Filament Protein 91 from Shen et al. 2018 (PMID: 30409885, doi: https://doi.org/10.1126/science.aau3775). Created by Gibson assembly using MluI (5') and NotI (3') sites. Please visit https://doi.org/10.1101/2024.05.08.593169 for bioRxiv preprint. Vector Backbone:pHR-dSV40; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin 2026-09-12 02:43:31 0
p3A2-Flag
 
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RRID:Addgene_234803 Arrestin-2 Bos taurus Ampicillin PMID:21466165 Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin none 2026-09-12 02:43:32 0
p3A2-HA
 
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RRID:Addgene_234804 Arrestin-2 Bos taurus Ampicillin PMID:21466165 Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin none 2026-09-12 02:43:32 0
p3A3-Flag
 
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RRID:Addgene_234805 Arrestin-3 Bos taurus Ampicillin PMID:21466165 Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin none 2026-09-12 02:43:32 0
pET28b-zDjCas13d-His
 
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RRID:Addgene_234481 DjCas13d Kanamycin PMID:40091120 DjCas13d ORF was codon optimized for zebrafish using iCodon (www.iCodon.org), purchased from IDT (https://eu.idtdna.com/) and cloned into pET28b vector after NcoI / NotI restriction enzyme digestion. Please visit https://doi.org/10.1101/2024.10.08.617220 for bioRxiv preprint. Vector Backbone:pET-28b-Cas9-His; Vector Types:Bacterial Expression, CRISPR; Bacterial Resistance:Kanamycin 2026-09-12 02:43:31 0
WestNileVirus_NC_009942_NS2B
 
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RRID:Addgene_234403 NS2B_WestNileVirus West Nile virus Kanamycin Vector Backbone:pET28a-LIC; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin 2026-09-12 02:43:31 0
ZIKV_KX377337.1_NS2B
 
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RRID:Addgene_234404 NS2B_ZIKV Zika virus Kanamycin Vector Backbone:pET28a-LIC; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin 2026-09-12 02:43:31 0
pVEA3-KNC
 
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RRID:Addgene_234801 Arrestin-3 Bos taurus Ampicillin PMID:22523077 Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin K11A, K12A, L49A, D51A, R52A, L69A, Y239A, D241A, C252A, P253A, D260A, Q262A 2026-09-12 02:43:32 0
pVEA3-delta7
 
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RRID:Addgene_234802 Arrestin-3 Bos taurus Ampicillin PMID:37371033 Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin deleted residues 176, 177, 178, 182-185 2026-09-12 02:43:32 0
FUGW U6 gLacZ dCas9-KRAB-T2a-GFP
 
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1+ mentions
RRID:Addgene_234883 L1HS gRNA Homo sapiens Ampicillin Please visit https://doi.org/10.1101/2025.01.17.633315 for bioRxiv preprint. Vector Backbone:pLV hU6-sgRNA hUbC-dCas9-KRAB-T2a-GFP; Vector Types:Mammalian Expression, Lentiviral, CRISPR; Bacterial Resistance:Ampicillin 2026-09-12 02:43:32 2
VWF-pHluorin-mRFP
 
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RRID:Addgene_234367 Von Willebrand factor Homo sapiens Kanamycin PMID:35767558 Backbone Marker:Robert Campbell & Michael Davidson & Roger Tsien (Addgene plasmid # 54635); Vector Backbone:pmRFP1-N1; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin 2026-09-12 02:43:31 0
makeTCR_HDR_Hs.TRAC_Backbone
 
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RRID:Addgene_233944 Kanamycin Backbone Marker:Twist Biosciences; Vector Backbone:pTwist Kan High Copy v2; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin 2026-09-12 02:43:31 0
pT3TS-Hf-RfxCas13d-HA
 
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RRID:Addgene_234479 RfxCas13d Ruminococcus flavefaciens XPD3002 Ampicillin PMID:40091120 Point mutations performed as described in Tong et al., 2023 (Nat Bio) to generate a High-Fidelity version of RfxCas13d (Hf-RfxCas13d). Please visit https://doi.org/10.1101/2024.10.08.617220 for bioRxiv preprint. Vector Backbone:pT3TS; Vector Types:CRISPR; Bacterial Resistance:Ampicillin Changed four alanine to valine in positions 134, 140, 141 and 143 (A134V, A140V, A141V and A143V) 2026-09-12 02:43:31 0
pQdCas12a.sggfp(C)
 
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RRID:Addgene_236042 quorum sensing cassette luxI, luxR, and the LuxR-dependent promoter pLuxI , dCas12a and sgRNA design (C) of gfp gene Kanamycin PMID:41021780 Backbone Size:3876; Vector Backbone:pBBRMCS2; Vector Types:CRISPR; Bacterial Resistance:Kanamycin 2026-09-12 02:43:33 0
pQdCas12a.luxR(mut)-sggfp(B)
 
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RRID:Addgene_236041 quorum sensing cassette luxI, mutated luxR, and the LuxR-dependent promoter pLuxI , dCas12a and sgRNA design (B) of gfp gene Kanamycin PMID:41021780 Backbone Size:3876; Vector Backbone:pBBRMCS2; Vector Types:CRISPR; Bacterial Resistance:Kanamycin 2026-09-12 02:43:33 0
EcoHIV-mScarlet
 
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RRID:Addgene_235598 NL4-3 EcoHIV mScarlet Synthetic Ampicillin PMID:39760359 The construct is a modification of pNL4-3-EcoHIV ( M.J. Potash, W. Chao, G. Bentsman, N. Paris, M. Saini, J. Nitkiewicz, P. Belem, L. Sharer, A.I. Brooks, & D.J. Volsky, A mouse model for study of systemic HIV-1 infection, antiviral immune responses, and neuroinvasiveness, Proc. Natl. Acad. Sci. U.S.A. 102 (10) 3760-3765, https://doi.org/10.1073/pnas.0500649102 (2005).) with inserted mScarlet. Backbone Size:2686; Vector Backbone:pUC18; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin 2026-09-12 02:43:32 0
pQdCas12a.sggfp(B)
 
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RRID:Addgene_236040 quorum sensing cassette luxI, mutated luxR, and the LuxR-dependent promoter pLuxI , dCas12a and sgRNA design (B) of gfp gene Kanamycin PMID:41021780 Backbone Size:4218; Vector Backbone:pBBRMCS2; Vector Types:CRISPR; Bacterial Resistance:Kanamycin 2026-09-12 02:43:33 0
pCAG-SpyTag-Flag-dNS-SRRM1-V5-mCherry
 
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RRID:Addgene_235096 pCAG-SpyTag-Flag-dNS-SRRM1-V5-mCherry Homo sapiens Ampicillin PMID:38720076 Vector Backbone:pCAG-MCP-DEST-V5-mCherry; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin The SRRM1 entry clone from DNASU was modified using a Q5 site directed mutagenesis kit (New England Biolabs) to delete the predicted region responsible for nuclear speckle localization as annotated using UniProt (https://www.uniprot.org/uniprotkb/Q8IYB3/entry) 2026-09-12 02:43:32 0

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