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Plasmids are provided by Addgene and DGRC.

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Plasmid Name Proper Citation Insert Name Organism Bacterial Resistance Defining Citation Comments Vector Backbone Description Relevant Mutation Record Last Update Mentions Count
pDONR207-MpPHOT
 
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RRID:Addgene_100600 MpPHOT Marchantia polymorpha Gentamicin PMID:27027881 Vector Backbone:pDONR207; Vector Types:Gateway Cloning; Bacterial Resistance:Gentamicin 2026-09-12 02:13:38 0
pMpGWB106-OEP7(1–50)
 
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RRID:Addgene_100602 OEP7(1–50)-Citrine Arabidopsis thaliana Spectinomycin PMID:28634853 Vector Backbone:pMpGWB106; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin 2026-09-12 02:13:38 0
hgRNA-A76_pLKO-Hyg
 
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RRID:Addgene_100568 hgRNA-A76 Ampicillin PMID:27918539 Vector Backbone:pLKO.1 Hygro; Vector Types:Mammalian Expression, Lentiviral, CRISPR, Synthetic Biology; Bacterial Resistance:Ampicillin 2026-09-12 02:13:38 0
YCe1717 HC_Kan_RFP-p8b
 
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RRID:Addgene_100618 Kanamycin PMID:28418644 It is used to standardize new parts for EMMA toolkit. New DNA fragments (parts) are cloned into this plasmid replacing the RFP gene through a BsaI Golden Gate reaction. The resulting plasmid will have the part flanked by BsmBI sites and the fusion sites corresponding to position 8b of EMMA platform. Vector Backbone:pSMART HC_Kan; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin 2026-09-12 02:13:38 0
FISSEQ-hgRNA-Design1
 
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RRID:Addgene_100571 FISSEQ-hgRNA-Design1 Ampicillin PMID:27918539 Vector Backbone:pLKO.1 Hygro; Vector Types:Mammalian Expression, Lentiviral, CRISPR, Synthetic Biology; Bacterial Resistance:Ampicillin 2026-09-12 02:13:38 0
YCe1502 HC_Kan_RFP-p3
 
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RRID:Addgene_100611 Kanamycin PMID:28418644 It is used to standardize new parts for EMMA toolkit. New DNA fragments (parts) are cloned into this plasmid replacing the RFP gene through a BsaI Golden Gate reaction. The resulting plasmid will have the part flanked by BsmBI sites and the fusion sites corresponding to position 3 of EMMA platform. Vector Backbone:pSMART HC_Kan; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin 2026-09-12 02:13:38 0
pTKEI-tLOV
 
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RRID:Addgene_100574 tLOV Synthetic Kanamycin PMID:28707884 Backbone Size:3712; Vector Backbone:pTKEI-Dest; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin 2026-09-12 02:13:38 0
pSLQ1651-sgRNA(F+E)-sgGal4
 
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1+ mentions
RRID:Addgene_100549 sgGal4 E. coli Ampicillin PMID:28841410 Backbone Marker:Addgene #51024; Vector Backbone:pSLQ1651-sgRNA(F+E); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin 2026-09-12 02:13:37 8
pEF1a-FB-dCas9-puro
 
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10+ mentions
RRID:Addgene_100547 N-terminal Flag and biotin-acceptor-site (FB)-tagged dCas9 Streptococcus pyogenes Ampicillin PMID:28841410 Backbone Size:7064; Vector Backbone:pEF1a-FB-puro; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin 2026-09-12 02:13:37 18
pcDNA3.1-TYMS
 
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1+ mentions
RRID:Addgene_100545 thymidylate synthetase Homo sapiens Ampicillin PMID:29100421 Backbone Marker:invitrogen; Backbone Size:5428; Vector Backbone:pCDNA3.1+; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-09-12 02:13:37 2
pcDNA3.1-TK1
 
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1+ mentions
RRID:Addgene_100544 thymidine kinase 1 Homo sapiens Ampicillin PMID:29100421 Backbone Marker:invitrogen; Backbone Size:5428; Vector Backbone:pCDNA3.1+; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-09-12 02:13:37 6
AAVS1_sgRNA
 
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1+ mentions
RRID:Addgene_100554 AAVS1 sgRNA Kanamycin PMID:28737741 Vector Backbone:gRNA_cloning_vector (#41824); Vector Types:; Bacterial Resistance:Kanamycin 2026-09-12 02:13:37 4
ciCas9(F22)_pcDNA5
 
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RRID:Addgene_100552 ciCas9(F22) Ampicillin PMID:28737741 Backbone Marker:Life Technology; Vector Backbone:pcDNA5/FRT/TO; Vector Types:Mammalian Expression, CRISPR, FRT, Flp-In; Bacterial Resistance:Ampicillin 2026-09-12 02:13:37 0
ciCas9(L22)_pcDNA5
 
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1+ mentions
RRID:Addgene_100551 ciCas9(L22) Ampicillin PMID:28737741 Backbone Marker:Life Technology; Vector Backbone:pcDNA5/FRT/TO; Vector Types:Mammalian Expression, CRISPR, FRT, Flp-In; Bacterial Resistance:Ampicillin 2026-09-12 02:13:37 1
EMX1*_sgRNA
 
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RRID:Addgene_100558 EMX1 sgRNA Kanamycin PMID:28737741 Vector Backbone:gRNA_cloning_vector (#41824); Vector Types:; Bacterial Resistance:Kanamycin 2026-09-12 02:13:37 0
MYC sgRNA5
 
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RRID:Addgene_100557 MYC sgRNA5 Kanamycin PMID:28737741 Vector Backbone:gRNA_cloning_vector (#41824); Vector Types:; Bacterial Resistance:Kanamycin 2026-09-12 02:13:37 0
MYC sgRNA4
 
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RRID:Addgene_100556 MYC sgRNA4 Kanamycin PMID:28737741 Vector Backbone:gRNA_cloning_vector (#41824); Vector Types:; Bacterial Resistance:Kanamycin 2026-09-12 02:13:37 0
YCe2986 HC_Kan_conn_H-J
 
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RRID:Addgene_100647 EMMA toolkit Assembly connector H-J Synthetic Kanamycin PMID:28418644 DNA element with no function. It is used as a bridge to connect parts placed in position 7 and 10 of EMMA platform. Vector Backbone:pSMART HC_Kan; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin 2026-09-12 02:13:38 0
YCe3735 HC_Kan_conn_Ha-K
 
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RRID:Addgene_100649 EMMA toolkit Assembly connector Ha-K Synthetic Kanamycin PMID:28418644 DNA element with no function. It is used as a bridge to connect parts placed in position 8a and 11 of EMMA platform. Vector Backbone:pSMART HC_Kan; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin 2026-09-12 02:13:38 0
YCe2984 HC_Kan_conn_B-L
 
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RRID:Addgene_100645 EMMA toolkit Assembly connector B-L Synthetic Kanamycin PMID:28418644 DNA element with no function. It is used as a bridge to connect parts placed in position 1 and 12 of EMMA platform. Vector Backbone:pSMART HC_Kan; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin 2026-09-12 02:13:38 0

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