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URL: https://github.com/SalasLab/HiTIMED
Proper Citation: HiTIMED (RRID:SCR_028180)
Description: Software DNA methylation-based algorithm, to estimate cell proportions in tumor microenvironment. Profiles tumor, immune, and angiogenic components, allowing researchers to study tumor composition and its clinical implications using archival biospecimens.
Synonyms: Hierarchical Tumor Immune Microenvironment Epigenetic Deconvolution
Resource Type: software application, software resource, source code
Defining Citation: PMID:36348337
Keywords: estimate cell proportions, cell type resolution, tumor microenvironment, tumor-type-specific DNA methylation data,
Funding: NCI P30 CA168524; NCI P50 CA097257; NCI R01 CA207360; NCI R01CA216265; NIGMS P20 GM130423; NIGMS P20GM103428; NIGMS P20GM104416
Availability: Free, Available for download, Freely available
Resource Name: HiTIMED
Resource ID: SCR_028180
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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