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URL: https://mousebrain.salk.edu/home
Proper Citation: Whole Mouse Brain Cell and Genome Atlas (RRID:SCR_024846)
Description: Web application as single cell DNA methylome and 3D Multi-omic atlas of the Adult Mouse Brain. Allows to visualize all molecular modalities (mCH, mCG, ATAC, chromatin conformation, RNA), metadata, and cell coordinates (tSNE, UMAP, or imputed MERFISH coordinates for methylome cells) in various scatter plots, as well as subclass genome tracks using HiGlass genome browser.Users can customize layouts based on their needs and save them for future use. Integrated ChatGPT, enables users to craft complex layouts using natural language to enhance user experience, particularly for those without programming expertise.
Resource Type: software resource, data or information resource, web application, atlas
Keywords: BICAN, Single cell DNA Methylome, 3D Multi omic Atlas, Adult Mouse Brain,
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