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URL: https://cran.r-project.org/web/packages/bio3d/index.html
Proper Citation: bio3d (RRID:SCR_024266)
Description: Softwar R package for comparative analysis of protein structures. Used to process, organize and explore protein structure, sequence and dynamics data. Used to read and write structure, sequence and dynamic trajectory data, perform sequence and structure database searches, data summaries, atom selection, alignment, superposition, rigid core identification, clustering, torsion analysis, distance matrix analysis, structure and sequence conservation analysis, normal mode analysis, principal component analysis of heterogeneous structure data, and correlation network analysis from normal mode and molecular dynamics data. Enables statistical and graphical power of R environment to work with biological sequence and structural data.
Synonyms: r-cran-bio3d, bio3d: Biological Structure Analysis
Resource Type: software toolkit, software resource
Defining Citation: PMID:16940322
Keywords: comparative analysis of protein structures, process protein structure, organize and explore protein structure, sequence and dynamics data,
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