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Resource Name

IDeFIX

RRID:SCR_024033 RRID Copied

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IDeFIX (RRID:SCR_024033)

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Resource Information

URL: https://gitlab.com/rki_bioinformatics/IDeFIX

Proper Citation: IDeFIX (RRID:SCR_024033)

Description: Software tool for demultiplexing Illumina NGS data. Reports inconsistencies between the raw data and the Sample Sheet, checks for duplicates of indices/ index combinations in the latter and removes unwanted characters from it. Creates an IDeFIX_Report.csv containing the indices/ index combinations from the raw data and their abundance as well as their count in the Sample Sheet and the corresponding Index ID(s).

Synonyms: idefix

Resource Type: data analysis software, data processing software, software application, software resource

Keywords: demultiplexing Illumina NGS data, reports inconsistencies, checks for duplicates of indices, removes unwanted characters,

Availability: Free, Available for download, Freely available,

Resource Name: IDeFIX

Resource ID: SCR_024033

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Data and Source Information

Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400

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