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Proper Citation: miRCode (RRID:SCR_023870)
Description: Web tool for transcriptome wide microRNA target prediction including lncRNAs.Used for whole transcriptome human microRNA target predictions based on the comprehensive GENCODE gene annotation, including long non-coding RNA genes. Coding genes are also covered, including atypical regions such as 5'UTRs and CDS. MicroRNA family definitions and names are consistent with TargetScan. Site conservation is aluated based on 46 vertebrates species.Map of putative microRNA target sites in the long non-coding transcriptome.
Resource Type: software resource, web application
Defining Citation: PMID:22718787
Keywords: microRNA target sites, target prediction, transcriptome wide microRNA target prediction, lncRNAs, whole transcriptome human microRNA,
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