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URL: https://github.com/greenelab/miQC
Proper Citation: miQC (RRID:SCR_022697)
Description: Software tool as flexible, probablistic metrics for quality control of scRNA-seq data. Adaptive probabilistic framework for quality control of single-cell RNA-sequencing data. Data driven QC metric that jointly models proportion of reads mapping to mtDNA and number of detected genes with mixture models in probabilistic framework to predict which cells are low quality in given dataset.
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:34428202
Keywords: scRNA-seq data quality control, QC metric, low quality data prediction, single cell RNA-sequencing data
Funding: Academy of Finland ; Cancer Foundation Finland ; European Union Horizon 2020 research and innovation program ; NCI CA237170; NHGRI HG009007
Availability: Free, Available for download, Freely available
Resource Name: miQC
Resource ID: SCR_022697
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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