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URL: https://github.com/r3fang/SnapATAC
Proper Citation: SnapATAC (RRID:SCR_020981)
Description: Software package for analyzing scATAC-seq datasets.Used to dissects cellular heterogeneity in unbiased manner and map trajectories of cellular states. Can process data from up to million cells. Incorporates existing tools into comprehensive package for analyzing single cell ATAC-seq dataset.
Synonyms: Single Nucleus Analysis Pipeline for ATAC-seq
Resource Type: data analysis software, data processing software, software application, software resource, software toolkit
Defining Citation: PMID:33637727
Keywords: scATAC-seq datasets analysis, dissects cellular heterogeneity, cellular states, map trajectories
Funding: NCI K99 CA252020; NIMH U19 MH114831; UCSD School of Medicine
Availability: Free, Available for download, Freely available
Resource Name: SnapATAC
Resource ID: SCR_020981
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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