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URL: https://github.com/tanghaibao/mcscan
Proper Citation: MCScan (RRID:SCR_017650)
Description: Software package to simultaneously scan multiple genomes to identify homologous chromosomal regions and subsequently align these regions using genes as anchors.Used to identify conserved gene arrays both within same genome and across different genomes. Command line program to wrap dagchainer and combine pairwise results into multi alignments in column format.
Synonyms: Multiple Collinearity Scan
Resource Type: data analysis software, data processing software, sequence analysis software, software application, software resource, software toolkit
Keywords: Simultaneously, scan, multiple, genome, identify, homologous, chromosomal, region, align, gene, anchor, bio.tools
Availability: Free, Available for downoad, Freely available
Resource Name: MCScan
Resource ID: SCR_017650
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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