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URL: https://github.com/nservant/HiC-Pro
Proper Citation: HiC-Pro (RRID:SCR_017643)
Description: Software tool as optimized and flexible pipeline for Hi-C data processing. Used to process Hi-C data, from raw fastq files, paired end Illumina data, to normalized contact maps.
Resource Type: data processing software, software application, software resource, workflow software
Defining Citation: PMID:26619908
Keywords: Hi-C, data, raw, fastq, file, paired, Illumina, normalized, contact, map, bio.tools
Funding: ABS4NGS project ; ERC Advanced Investigator award ; European Commission ; European Research Coucil ; France Genomique National infrastructure ; Howard Hughes Medical Institute ; Labex Deep ; National Human Genome Research Institute ; Paris Alliance of Cancer Research Institutes
Availability: Free, Available for download, Freely available
Resource Name: HiC-Pro
Resource ID: SCR_017643
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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