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URL: https://github.com/davidaknowles/leafcutter/
Proper Citation: LeafCutter (RRID:SCR_017639)
Description: Software tool for identifying and quantifying RNA splicing variation. Used to study sample and population variation in intron splicing. Identifies variable intron splicing events from short read RNA-seq data and finds alternative splicing events of high complexity. Used for detecting differential splicing between sample groups, and for mapping splicing quantitative trait loci (sQTLs).
Resource Type: software application, data processing software, data analysis software, data analytics software, software resource
Defining Citation: PMID:29229983, DOI:10.1038/s41588-017-0004-9
Keywords: Identify, quantitate, RNA, splicing, variation, intron, short, read, RNAseq, data, mapping, trait, loci, sQTL
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