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Resource Name
MITE-Tracker
RRID:SCR_017030 RRID Copied      
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MITE-Tracker (RRID:SCR_017030)
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Resource Information

URL: https://github.com/INTABiotechMJ/MITE-Tracker

Proper Citation: MITE-Tracker (RRID:SCR_017030)

Description: Open source software tool for identifying miniature inverted repeat transposable elements in large genomes. Used to process large scale genomes, to find and classify MITEs using an efficient alignment strategy to retrieve nearby inverted repeat sequences.

Abbreviations: MITE Tracker

Synonyms: MITE Tracker, Miniature Inverted repeats Transposable Elements Tracker

Resource Type: data analysis software, data processing software, sequence analysis software, software application, software resource

Defining Citation: DOI:10.1186/s12859-018-2376-y

Keywords: genomic, sequence, discover, miniature, inverted, repeat, transposable, element, clustering, cdhit

Funding: National Council for Science and Technology ; Argentina ; National Institute of Agricultural Technology

Availability: Free, Available for download, Freely available

Resource Name: MITE-Tracker

Resource ID: SCR_017030

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This resource

uses

NCBI BLAST

is listed by

OMICtools

is related to

Python Programming Language

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Data and Source Information

Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400