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URL: https://github.com/lh3/fermi-lite
Proper Citation: fermi-lite (RRID:SCR_016112)
Description: Standalone C library as well as a command-line tool for assembling Illumina short reads in small regions. It is an overlap-based assembler used in sequencing to retain heterozygous events and to assemble diploid regions for the purpose of variant calling.
Synonyms: FermiKit, Fml-asm
Resource Type: algorithm resource, alignment software, data processing software, image analysis software, software application, software resource, standalone software
Defining Citation: PMID:26220959
Keywords: assembling, short, read, small, region, sequencing, retain, heterozygous, event, diploid, variant, calling
Funding: NHGRI U54 HG003037; NIGMS GM100233
Availability: Free, Available for download
Resource Name: fermi-lite
Resource ID: SCR_016112
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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