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URL: http://pasapipeline.github.io/
Proper Citation: PASA (RRID:SCR_014656)
Description: Gene structure annotation and analysis tool that uses spliced alignments of expressed transcript sequences to automatically model gene structures. It also incorporates gene structures based on transcript alignments into existing gene structure annotations. It is one component of a larger eukayotic annotation pipeline implemented at the Broad Institute.
Synonyms: Program to Assemble Spliced Alignments (PASA), Program to Assemble Spliced Alignments
Resource Type: sequence analysis software, software resource, software application, data analysis software, data processing software
Defining Citation: DOI:10.1093/nar/gkg770
Keywords: gene structure, annotation, gene structure analysis tool, spliced alignment, transcript sequence, bio.tools
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