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URL: http://www.scienceexchange.com/facilities/csisp-bioinformatics-biostatistics-csisp
Proper Citation: CSISP Bioinformatics and Biostatistics (RRID:SCR_012287)
Description: THIS RESOURCE IS NO LONGER IN SERVCE, documented January 24, 2019. Core provides advisory services in study planning and data mining (debugging, analysis and interpretation of results) resulting from the sequencing of DNA and RNA. Core's goal is to help extract all possible information from sequencing data which will be useful for projects. Applications: Sequence trimming and quality control (quality index, length of sequences, etc...). Taxonomic assignment of prokaryotic 16S rDNA sequences. Comparative ecological analysis of environmental and/or clinical microbial communities based on 16S rDNA taxonomy. Assembly and/or annotation of genomes and metagenomes. Transcriptome annotation. Determination of SNPs in resequencing studies in bacterial systems. Sending Data. Sequences can be submitted in any of the usual formats (FASTA, SFF, FASTQ, etc) along with a description of the experimental design (including sufficient details) and the relevant information associated with each sample in order to perform the necessary analyses (factors associated with the samples, sub-samples, etc.).
Abbreviations: CSISP Bioinformatics & Biostatistics
Synonyms: , Biostatistics, Centro Superior de Investigacion en Salud Publica, Center for Public Health Research, Bioinformatics
Resource Type: nif annotation standard, availability annotation standard, service resource, narrative resource, core facility, this resource is no longer in service, standard specification, access service resource, data or information resource
Keywords: bioinformatic, biostatistic, metagenome, resequencing, Transcriptome annotation, Assembly of genome, annotation of genome,
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