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URL: http://humanmetabolism.org/
Proper Citation: Recon x (RRID:SCR_006345)
Description: A comprehensive biochemical knowledge-base on human metabolism, this community-driven, consensus metabolic reconstruction integrates metabolic information from five different resources: * Recon 1, a global human metabolic reconstruction (Duarte et al, PNAS, 104(6), 1777-1782, 2007) * EHMN, Edinburgh Human Metabolic Network (Hao et al., BMC Bioinformatics 11, 393, 2010) * HepatoNet1, a liver metabolic reconstruction (Gille et al., Molecular Systems Biology 6, 411, 2010), * Ac/FAO module, an acylcarnitine/fatty acid oxidation module (Sahoo et al., Molecular bioSystems 8, 2545-2558, 2012), * a human small intestinal enterocytes reconstruction (Sahoo and Thiele, submitted). Additionally, more than 370 transport and exchange reactions were added, based on a literature review. Recon 2 is fully semantically annotated (Le Nov��re, N. et al. Nat Biotechnol 23, 1509-1515, 2005) with references to persistent and publicly available chemical and gene databases, unambiguously identifying its components and increasing its applicability for third-party users. Here you can explore the content of the reconstruction by searching/browsing metabolites and reactions. Recon 2 predictive model is available in the Systems Biology Markup Language format.
Abbreviations: Recon x
Synonyms: Recon x Reconstruction of The Human Genome, Recon x - Reconstruction of The Human Genome, Recon x: Reconstruction of The Human Genome, Recon 2
Resource Type: data or information resource, database
Defining Citation: PMID:23455439
Keywords: metabolism, annotation, metabolite, reaction, genome, reconstruction
Funding: Knut and Alice Wallenberg Foundation ; Marie Curie International Reintegration Grant 249261; European Research Council 232816; Rannis research 100406022; Manchester Centre for Integrative Systems Biology BB/C008219/1; Bioprocessing Research Industry Club ; European Union FP7 201142; BBSRC BB/F005938; BBSRC BB/F00561X; DFG 0315756; DFG 0315741; NIGMS GM088244; NSF 0643548; Cystic Fibrosis Research Foundation 1060
Availability: Free, Acknowledgement requested
Resource Name: Recon x
Resource ID: SCR_006345
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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