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URL: http://www.broadinstitute.org/cancer/cga/rna-seqc
Proper Citation: RNA-SeQC (RRID:SCR_005120)
Description: Java software which computes a series of quality control metrics for RNA-seq data and can compare sequencing quality across different samples or experiments to evaluate different experimental parameters. The input can be one or more BAM files, and the output consists of HTML reports and tab delimited files of metrics data.
Abbreviations: RNA-SeQC
Resource Type: software resource
Defining Citation: PMID:22539670
Keywords: java, bam file, html, sequence comparison, rnaseq, rna sequence, bio.tools
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