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URL: http://compbio.cs.toronto.edu/prism/
Proper Citation: PRISM - Pair Read Informed Split Mapper (RRID:SCR_004812)
Description: Software for split read (reads which span across a structrual variant -- SV ) mapping and SV calling from the mapping result. It is able to detect small insertions and abitrary size deletions, inversions and tandom duplications with the direction of discordant read pairs. PRISM_CTX is a tool for detecting inter-chromosome trans-location events.
Abbreviations: PRISM (Pair Read Informed Split Mapper)
Synonyms: PRISM (Pair Read Informed Split Mapper), Pair Read Informed Split Mapper
Resource Type: software resource
Defining Citation: PMID:22851530
Keywords: structural variant, split read mapping, insertion, deletion, inversion, tandom duplication, discordant read pair, chromosome, trans-location event, duplication, breakpoint, genome
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