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URL: https://www.med.unc.edu/pgc/
Proper Citation: Psychiatric Genomics Consortium (RRID:SCR_004495)
Description: Consortium conducting meta-analyses of genome-wide genetic data for psychiatric disease. Focused on autism, attention-deficit hyperactivity disorder, bipolar disorder, major depressive disorder, schizophrenia, anorexia nervosa (AN), Tourette syndrome (TS), and obsessive-compulsive disorder (OCD). Used to investigate common single nucleotide polymorphisms (SNPs) genotyped on commercial arrays, structural variation (copy number variation) and uncommon or rare genetic variation. To participate you are asked to upload data from your study to central computer used by this consortium. Genetic Cluster Computer serves as data warehouse and analytical platform for this study . When data from your study have been incorporated, account will be provided on central server and access to all GWAS genotypes, phenotypes, and meta-analytic results relevant to deposited data and participation aims. NHGRI GWAS Catalog contains updated information about all GWAS in biomedicine, and is usually excellent starting point to find comprehensive list of studies. Files can be obtained by any PGC member for any disease to which they contributed data. These files can also be obtained by application to NIMH Genetics Repository. Individual-level genotype and phenotype data requires application, material transfer agreement, and informed consent consideration. Some datasets are also in controlled-access dbGaP and Wellcome Trust Case-Control Consortium repositories. PGC members can also receive back cleaned and imputed data and results for samples they contributed to PGC analyses.
Abbreviations: PGC
Synonyms: Psychiatric Genomics Consortium, PGC, Psychiatric GWAS Consortium
Resource Type: computational hosting, data or information resource, data analysis service, storage service resource, organization portal, analysis service resource, portal, service resource, community building portal, production service resource, consortium, data repository
Defining Citation: PMID:20955924, PMID:19895722, PMID:19648536, PMID:19339359, PMID:19002139
Keywords: structural variation, genetic variation, single nucleotide polymorphism, attention deficit-hyperactivity disorder, bipolar disorder, schizophrenia, mental disease, one mind ptsd, data sharing, visualization, genome-wide association study, genomic, genotype, phenotype, psychiatry, gwas, copy number variation, FASEB list
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University of North Carolina at Chapel Hill; North Carolina; USA |
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