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URL: http://app.mc.uky.edu/kolab/rogedendo.aspx
Proper Citation: rOGED: Rat Ovarian Gene Expression Database (RRID:SCR_003615)
Description: THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 6, 2023. rOGED is a searchable database containing ovarian gene sequences, data, and images of ovarian genes expressed in rats. The site also provides customized gene expression profiles in the rat oviduct and uterus or mouse ovary. The database was constructed from total RNA isolated from intact ovaries, granulosa cells, or residual ovarian tissues collected from immature PMSG/hCG-treated rats at 0 (no PMSG), 12, and 48 h post-PMSG, as well as 6 and 12 h post-hCG. The total RNA was used for DNA microarray analysis using Affymetrix Rat Expression Arrays 230A and B. The microarray data was compiled and utilized for display of individual gene expression profiles through specially developed software. The final rOGED provides immediate analysis of temporal gene expression profiles for over 28,000 genes in intact ovaries, granulosa cells, and residual ovarian tissue during follicular growth and the preovulatory period. The accuracy of the rOGED was validated against the gene profiles for over 100 known genes. The utility of the rOGED was demonstrated by identifying seven genes which have not been described in the rat periovulatory ovary. The rOGED can be used as an instant reference for ovarian gene expression profiles, as well as reliable resource for identifying important yet, to date, unknown ovarian genes. Category: Microarray Data and other Gene Expression Databases
Abbreviations: rOGED
Resource Type: database, data or information resource
Defining Citation: PMID:15297439
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