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URL: http://compbio.iupui.edu/group/6/pages/alteventfinder
Proper Citation: Alt Event Finder (RRID:SCR_001846)
Description: Software tool for deriving data-driven alternative splicing (AS) events from RNA-seq data. It analyses the transcripts built by Cufflinks or Scripture and outputs AS event annotations which is compatible with MISO. It can be used for annotating novel AS events from a well-annotated species such as human. It can also be used for species of which known AS event annotation is not available. The current release (v0.1) supports skipped exon events only.
Abbreviations: Alt Event Finder
Synonyms: Alt Event Finder: A tool for extracting alternative splicing events from RNA-seq data
Resource Type: software resource
Defining Citation: PMID:23281921
Keywords: alternative splicing, rna-seq, alternative splicing event, transcript, annotation, splicing regulation
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