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URL: http://www.broadinstitute.org/mpg/birdsuite/birdseed.html
Proper Citation: Birdseed (RRID:SCR_001122)
Description: THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022.SNP genotyping algorithm that runs on the Affymetrix 500K, SNP5.0, and SNP6.0 platforms. This software runs a clustering algorithm and generally should be run on a sample at least 50 times. It utilizes an Expectation-Maximization (EM) algorithm to produce genotypes and confidence scores for every individual at every SNP.
Resource Type: algorithm resource, software resource
Defining Citation: PMID:21734406, PMID:20865519
Keywords: snp, genotype, clustering, expectation maximization, algorithm, confidence score, single nucleotide polymorphism
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: Birdseed
Resource ID: SCR_001122
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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