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URL: http://www.broadinstitute.org/mpg/birdsuite/birdseed.html
Proper Citation: Birdseed (RRID:SCR_001122)
Description: THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022.SNP genotyping algorithm that runs on the Affymetrix 500K, SNP5.0, and SNP6.0 platforms. This software runs a clustering algorithm and generally should be run on a sample at least 50 times. It utilizes an Expectation-Maximization (EM) algorithm to produce genotypes and confidence scores for every individual at every SNP.
Resource Type: software resource, algorithm resource
Defining Citation: PMID:21734406, PMID:20865519
Keywords: snp, genotype, clustering, expectation maximization, algorithm, confidence score, single nucleotide polymorphism
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