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URL: http://gmt.genome.wustl.edu/pindel/0.2.4/
Proper Citation: Pindel (RRID:SCR_000560)
Description: Software to detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Abbreviations: Pindel
Resource Type: software resource
Defining Citation: PMID:19561018
Keywords: deletion, insertion, nucleotide, genome, read, inversion, tandem duplication, structural variant, next-generation sequencing, pattern growth, indel, breakpoint, bio.tools
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: Pindel
Resource ID: SCR_000560
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Washington University School of Medicine in St. Louis; Missouri; USA |
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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