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URL: https://github.com/Yonghao-Holden/TEProf3
Proper Citation: TEProf3 (RRID:SCR_027288)
Description: Software pipeline to detect Transposable Elements transcripts. Used to identify TE-derived promoters and transcripts using transcriptomic data from multiple sources, including short-read RNA-seq data, long-read RNA-seq data and single cell RNA-seq data.
Synonyms: , TE-derived Promoter Finder 3
Resource Type: software resource, software toolkit, source code
Defining Citation: PMID:40360186
Keywords: Transposable Elements, Transposable Elements transcripts, detect TE transcripts, transcriptomic data, short-read RNA-seq data, long-read RNA-seq data, single cell RNA-seq data,
Funding: NHGRI R01HG007175; NHGRI U01HG013227; NIA R01AG078958; NINDS U24NS132103
Availability: Free, Available for download, Freely available,
Resource Name: TEProf3
Resource ID: SCR_027288
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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