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URL: https://github.com/TaliaferroLab/LABRAT
Proper Citation: LABRAT (RRID:SCR_025006)
Description: Software application to quantify usage of alternative polyadenylation and cleavage sites in RNAseq data and identify genes whose usage of these sites varies across experimental conditions.
Synonyms: Lightweight Alignment Based Resolution of Alternative Three prime ends
Resource Type: software application, software resource, source code
Defining Citation: DOI:10.1186/s12864-021-07781-1
Keywords: quantify usage, alternative polyadenylation, cleavage sites, RNAseq data, identify genes,
Funding: NIGMS R35 GM118051; NIGMS R35 GM133885; NIGMS T32 GM008730; RNA Bioscience Initiative at the University of Colorado Anschutz Medical Campus
Availability: Free, Available for download, Freely available
Resource Name: LABRAT
Resource ID: SCR_025006
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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