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URL: https://github.com/shendurelab/LACHESIS
Proper Citation: LACHESIS (RRID:SCR_017644)
Description: Software tool for chromosome scale scaffolding of de novo genome assemblies based on chromatin interactions.Method exploits signal of genomic proximity in Hi-C datasets for ultra long range scaffolding of de novo genome assemblies.
Synonyms: Ligating Adjacent Chromatin Enables Scaffolding In Situ
Resource Type: data processing software, software application, software resource
Defining Citation: PMID:24185095
Keywords: Chromosome, scale, scaffolding, de novo, genome, assembly, chromatin, Hi-C, data, clustering, contig
Funding: National Science Foundation ; NHGRI HG006283; NHGRI T32 HG000035
Availability: Free, Available for download, Freely available
Resource Name: LACHESIS
Resource ID: SCR_017644
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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