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URL: https://github.com/BDI-pathogens/phyloscanner
Proper Citation: phyloscanner (RRID:SCR_017400)
Description: Software tool for analysing pathogen genetic diversity and relationships between and within hosts at once, in windows along genome. Inferring transmission from within and between host pathogen genetic diversity.
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:29186559
Keywords: Analysing, pathogen, genetic, diversity, relationship, host, genome
Funding: Bill & Melinda Gates Foundation ; ERC Advanced Grant ; Medical Research Council
Availability: Free, Available for download, Freely available
Resource Name: phyloscanner
Resource ID: SCR_017400
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400