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Resource Name

PiGx

RRID:SCR_016476 RRID Copied

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PiGx (RRID:SCR_016476)

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Resource Information

URL: http://bioinformatics.mdc-berlin.de/pigx/

Proper Citation: PiGx (RRID:SCR_016476)

Description: Software application as a collection of genomic pipelines used for raw fastq read data of bisulfite experiments, RNAseq samples, single cell dropseq analysis, reads from ChIPseq experiments, analysis of sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data.

Abbreviations: PiGx

Synonyms: Pipelines in Genomics

Resource Type: data analysis software, data processing software, sequence analysis software, software application, software resource, software toolkit

Keywords: collection, genomic, pipeline, bisulfite, sequencing, rnaseq, chipseq, single, cell, reproducibility, sample, analysis, mutation, data

Funding: European Union Horizon 2020 No 654248; German Federal Ministry of Education and Research (BMBF) 031 A538C RBC (de.NBI)

Availability: Free, Available for download, Freely available

Resource Name: PiGx

Resource ID: SCR_016476

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Usage and Citation Metrics

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Data and Source Information

Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400

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