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Name: FMA
Keywords: anatomy, informatics, model, neuroanatomy, protg, reference, standard, structural, taxonomy, owl, phenotype

Resource Name

FMA

RRID:SCR_003379 RRID Copied

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FMA (RRID:SCR_003379)

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Resource Information

URL: http://sig.biostr.washington.edu/projects/fm/

Proper Citation: FMA (RRID:SCR_003379)

Description: A domain ontology that represents a coherent body of explicit declarative knowledge about human anatomy. It is concerned with the representation of classes or types and relationships necessary for the symbolic representation of the phenotypic structure of the human body in a form that is understandable to humans and is also navigable, parseable and interpretable by machine-based systems. Its ontological framework can be applied and extended to all other species. The description of how the OWL version was generated is in Pushing the Envelope: Challenges in a Frame-Based Representation of Human Anatomy by N. F. Noy, J. L. Mejino, C. Rosse, M. A. Musen: http://bmir.stanford.edu/publications/view.php/pushing_the_envelope_challenges_in_a_frame_based_representation_of_human_anatomy The Foundational Model of Anatomy ontology has four interrelated components: # Anatomy taxonomy (At), # Anatomical Structural Abstraction (ASA), # Anatomical Transformation Abstraction (ATA), # Metaknowledge (Mk), The ontology contains approximately 75,000 classes and over 120,000 terms; over 2.1 million relationship instances from over 168 relationship types link the FMA's classes into a coherent symbolic model.

Abbreviations: FMA

Synonyms: Foundational Model of Anatomy Ontology, Foundational Model of Anatomy

Resource Type: controlled vocabulary, data analysis software, data or information resource, data processing software, database, ontology, software application, software resource

Defining Citation: PMID:18688289, PMID:18360535, PMID:16779026

Keywords: anatomy, informatics, model, neuroanatomy, protg, reference, standard, structural, taxonomy, owl, phenotype

Funding: RSNA-NIBIB ; University of Washington; Washington; USA ; Murdock Charitable Trust ; Microsoft ; Intel Corporation ; NLM LM006822; NLM LM06316; NLM contract LM03528; NHLBI HL08770

Availability: Free, Freely available

Resource Name: FMA

Resource ID: SCR_003379

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This resource

is listed by	BioPortal
is related to	T3DB
is related to	HIV Brain Sequence Database
is related to	CELDA Ontology
has parent organization	University of Washington; Seattle; USA

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Data and Source Information

Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400

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