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Proper Citation: HvrBase++- an mtDNA database (RRID:SCR_002954)
Description: HvrBase++ is the improved and extended version of HvrBase. Extensions are made by adding more population-based sequence samples from all primates including humans. The current collection comprises 13,873 hypervariable region I (HVRI) sequences and 4940 hypervariable region II (HVRII) sequences. In addition, we included 1376 complete mitochondrial genomes, 205 sequences from X-chromosomal loci and 202 sequences from autosomal chromosomes 1, 8, 11 and 16. In order to reduce the introduction of erroneous data into HvrBase++, we have developed a procedure that monitors GenBank for new versions of the current data in HvrBase++ and automatically updates the collection if necessary. For the stored sequences, supplementary information such as geographic origin, population affiliation and language of the sequence donor can be retrieved. As a new key feature, HvrBase++ provides an interactive graphical tool to easily access data from dynamically created geographical maps.
Synonyms: HvrBase++
Resource Type: data or information resource, database
Defining Citation: PMID:16381963
Keywords: chromosome, hypervariable region, mitochondrial dna, mtdna
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